Oceanisphaera avium: CBP12_12955
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Entry
CBP12_12955 CDS
T04855
Name
(GenBank) penicillin-sensitive transpeptidase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00550
Peptidoglycan biosynthesis
ocm01100
Metabolic pathways
ocm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CBP12_12955
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CBP12_12955
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocm01003
]
CBP12_12955
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocm01011
]
CBP12_12955
Enzymes [BR:
ocm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CBP12_12955
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CBP12_12955
Glycosyltransferases [BR:
ocm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CBP12_12955
Peptidoglycan biosynthesis and degradation proteins [BR:
ocm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CBP12_12955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ART80952
UniProt:
A0A1Y0D034
LinkDB
All DBs
Position
complement(2805036..2807414)
Genome browser
AA seq
792 aa
AA seq
DB search
MLKWLTRLFLLGLFLALCAVAGVFVLYQQVKPELPDVSELKDIRLEIPMRIFSQDNELIS
QYGEQRRTPIAIADMPSQLIDAVLATEDARFYEHPGIDIIGISRAATVWFTTGEKRQGAS
TITQQVARNFFLSREKTVTRKIKEIFLALHIESLLSKDEILALYLNKIPLGHRSHGVGAA
AQVYYGKEVSELTLAESAMIAGLPQGPSVLNPISNPARAAERRAVVLGRMLETGKINRVQ
YNEAMEAPVATRYHGAEITLNAPYVAEMAHQFALSMFGEEAYTKGLKVYTTIDSKEQQAG
TQALVDGLLAYDLRHGYRGATDHLWQDSPWSLDKIEEYLAGQPSYWPLEPAIVTEVSAQS
ATVIAKNQGEQTLAWDGLKWARPYISDARQGHALRQASAALKAGDLIWIRPQGEQWMLAQ
LPEINGALAALDPNNGAITAIVGGFNFTLNKFNRAQQAERQMGSNIKPFIYSAALDNGYS
LASMVNDAPINHWDPGSGKSWRPRNSPNVYDGPIRVREALARSKNVVSIRLLQGAGIPAA
LQRLNDLGFDTERIPATDSLALGSPSATPLQMVTGYAAFANGGKKVTPYIVERIEDSQGV
TLYEAQPQTTQVLSEETAFLISQALSSAIWGGTSNGRHWNGTGWRAGKALERKDIAGKTG
TTNDSRDAWFSGFTPDRVASAWVGFDDFARPLGRTAYNANLDGSQVAGGEFGASTALPIW
IAYMKAALADFPEHIKDMPEGLYTTTIDPNTGLKTNGEGITEYFVPGSEPKYYSLPETRQ
SFGGTSVTDDLF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaatggctaacccgcctctttttattgggcttattcttggcactctgcgccgtc
gccggtgtgtttgtgctttatcagcaggttaagcctgagctgcccgatgtttctgaactg
aaagatatccgccttgaaatacccatgcgtattttcagtcaagataatgagctcatctca
caatatggcgaacaaagacgcacccctatcgccattgccgatatgccctcacaacttatt
gacgcggttttagccacagaagacgctcgtttttatgaacaccctggcattgatatcatt
ggtatcagccgggccgctaccgtgtggtttactacgggtgaaaagcgccaaggcgccagt
accatcacccaacaagtggcacgcaacttctttttaagccgagaaaaaaccgttacccgc
aaaattaaagaaatttttctggccctgcatattgagtccttgttaagcaaagatgaaatt
ttggccttgtacttaaataaaatccccctaggtcatcgctctcatggtgtgggcgctgcg
gcacaggtgtattacggcaaagaagtctcggagttaacgttagctgagtcagccatgatc
gccggcctgccccaaggcccttcagtattaaatccaattagtaacccagcgcgcgccgct
gagcgcagagccgtggtgttagggcgcatgttagaaaccggtaaaattaatcgcgtgcaa
tacaatgaagccatggaagcccccgtagccacgcgctaccacggcgctgaaatcacctta
aatgcaccttatgtcgcagaaatggcgcatcaatttgcgctgagtatgtttggtgaagag
gcctataccaagggcttaaaagtttataccaccattgactccaaggagcagcaagccggc
actcaagccttagtggatggcttattagcctatgatttacgccacggctatcgtggtgcg
accgatcatttatggcaagactcgccatggtctttggataaaattgaagaatatttagcc
gggcaacccagttattggccgttagagcctgccatagtgacagaggttagcgcacagagc
gccactgttatcgcaaaaaatcaaggtgagcaaacactcgcttgggacggcttaaaatgg
gcacgcccttatatttctgacgctcgccaaggccatgcactgcgccaagccagtgcggcc
cttaaggcaggagatctaatttggatccgcccccaaggtgagcagtggatgctggcgcaa
ttgccagaaattaatggggcattggccgcccttgatcctaataacggcgccattactgcc
atagtaggcggctttaactttactttaaataaattcaatcgtgctcagcaagctgagcgc
cagatgggctctaatattaaaccctttatttattctgcagcactggataatggctatagc
ctagcgagcatggtcaacgatgcgcctattaaccactgggatccgggcagtggtaaaagc
tggcgccctcgtaactcgcctaatgtgtatgatggccctattagagttagagaagcattg
gcacgttctaaaaacgtggtatctattcgcctactacaaggcgccggcattcctgcggca
ttacaacgccttaatgacttaggctttgatactgagcgtattccggccaccgacagttta
gcactaggctcgccctcagccacgcctttacagatggttaccggttatgccgcctttgct
aatggcggtaaaaaagtcacgccttatatcgtagaacgcatcgaagatagccaaggcgtt
accttatatgaagctcagccgcaaaccactcaggtactcagtgaagaaacagcgttttta
atcagccaagcgttaagctcagctatttgggggggcaccagtaatggccgccactggaat
ggcaccggctggcgtgctggtaaagcactagagagaaaagatatcgccggcaaaactggc
accaccaacgactcgcgtgatgcttggttctctggctttaccccagatcgggtagccagt
gcttgggtaggatttgatgactttgcacggcccttagggcgcaccgcttacaatgctaac
ttagatggcagtcaagtcgcgggaggcgagtttggcgcaagtacagcgctgcccatttgg
attgcgtatatgaaagcggcactggcggattttcccgagcatattaaagacatgcccgag
ggcttatacaccaccactatcgatcccaataccggcttaaagaccaatggcgagggcatt
actgaatattttgtgccaggtagtgagcctaaatattacagcctgccagaaacacgccag
tcgtttggcggcactagcgtcacagatgacttattttaa
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