Afipia carboxidovorans OM4: OCA4_c19390
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Entry
OCA4_c19390 CDS
T01967
Symbol
valS
Name
(GenBank) valine-tRNA ligase ValS
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCA4_c19390 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oco01007
]
OCA4_c19390 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oco03016
]
OCA4_c19390 (valS)
Enzymes [BR:
oco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
OCA4_c19390 (valS)
Amino acid related enzymes [BR:
oco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
OCA4_c19390 (valS)
Transfer RNA biogenesis [BR:
oco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
OCA4_c19390 (valS)
Prokaryotic type
OCA4_c19390 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1f
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
AEI03075
LinkDB
All DBs
Position
complement(2092500..2095385)
Genome browser
AA seq
961 aa
AA seq
DB search
MIVPVMIEKNYQPAEIEPRIREAWDAAEAFKAGRPERREAEPFTIVIPPPNVTGSLHMGH
ALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQLAARKEPTRREMGREAFLD
RVWQWKAESGDTIVNQLKRLGASCDWSRERFTMDEGLSRAVAKVFCTLYAEGLIYKDKRL
VNWDPKLLTAISDLEVQQVEVKGHLWHLRYPYEDKTFNPDDPSTYIVVATTRPETMLGDS
AVAVNPADDRYRNVVGLNVVLPLVGRRIPIVADDYSDPEKGSGAVKITPAHDFNDFEVGR
RHKLPQINILDIEGRLALADNDDYRKDIEQSGLDLIAELHGVERFAARREIVARLEQQGY
LEKIEPNTHMVPHGDRSGVVIEPFLTDQWYVDAKTLAAPAIAAVRNGETSFVPKNWEKTY
FEWMENIQPWCISRQLWWGHQIPAWYGPDGKVFVAETEEEAVGKALAYYLEEGVIDDDQA
HDMAVDPAKRDEFITRDEDVLDTWFSSALWPFSTLGWPDTDKEVKRYYPTSVLVTGFDII
FFWVARMMMMGLHFMNDVPFPTVYIHALVRDEKGAKMSKSKGNVIDPLHLIDEYGADALR
FTLAAMAAQGRDIKLATSRVEGYRNFATKLWNASRFAEMNGCALAKGFDATRCKETLNRW
IAHETSHATHEVTEAIRAYRFNDAAGAMYRFVWNVYCDWYLELAKPVLLGPDSEAKRETQ
AAVAWARDEILKLLHPFMPYITEELWAVTAPRDNVLALAAWPIQPDDEIALEASMQAAMA
GDPLAVPVMTSSALKAEAFSDPKAEAEIGWLIDLVTAIRSVRAEMNIAPATLFPLILVNA
SKELQARAQRWSDVIKRMARVAEISFDAAAPQGSLQLLVRGEVAAIPLKGVIDLAAEKTR
LEKELGKADADIARVDAKLGNEKFVANAPEEVIDEQREKREEAVTRRTKIVEAIERLKAA
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgattgtacccgtgatgatcgagaaaaattaccagcctgccgaaatcgagccgcgcatc
cgcgaggcatgggacgccgcggaagccttcaaggctggccgcccggagcgccgcgaggct
gagccgttcacgatcgtcattccgccgccgaacgtcaccggctcgctgcacatggggcac
gcgctcaacaacacgctgcaggacatcctgtgccggttcgagcgcatgcgcgggcgcgat
gtgctgtggcagcccggcaccgatcatgccggcatcgcgacgcagatggtggtcgagcgc
cagcttgccgcgcgcaaggagccgacgcgccgcgagatgggacgcgaagcattcctcgat
cgcgtctggcagtggaaggcggaatccggcgacaccatcgtcaaccagttgaagcggtta
ggggcctcctgcgattggtcgcgcgagcgcttcaccatggacgagggactgtcgcgcgcc
gtcgccaaggtgttctgcacgctctatgctgaaggcctgatctacaaggacaagcgtctg
gtcaactgggacccgaagctgcttaccgcgatctccgatctcgaagtgcagcaggtcgag
gtcaaggggcatctctggcacctgcgctatccttacgaggacaagaccttcaatccggac
gatccatcgacctacatcgtggttgcgacgacgcggccggaaacgatgctgggcgacagt
gcggtcgcggtgaacccggccgacgatcgctatcgcaacgttgtcggcctgaatgtcgtg
ctgcctttagtcggccgcaggattccgattgttgccgatgactattccgatccggagaag
ggctctggcgcggtgaagatcacgccggcgcacgacttcaacgacttcgaggtcggcagg
cgccacaagctgccgcagatcaacatcctcgatatcgaaggacgcctcgcgctcgctgat
aacgacgactatcgcaaggacatcgagcagagcggcctcgacctgatcgcggagctgcac
ggcgtggagcgctttgccgcacgccgcgagatcgtcgcgcgtctcgagcaacagggctat
ctcgagaagatcgagcccaacacgcacatggtgccgcatggcgaccgttcgggcgtcgtg
atcgagccgttcctcaccgaccagtggtacgtcgacgccaagacgctcgccgcgcccgcg
attgcggccgtgcgcaacggcgaaacctcgttcgtgccaaagaactgggaaaagacctat
ttcgagtggatggagaacatccagccctggtgcatctcacgccagctctggtggggccat
cagattcccgcatggtacggcccggacggaaaagtgttcgtcgccgagacggaagaagag
gcggtcggcaaggcgcttgcctattacctcgaggaaggcgtcatcgacgacgatcaggcg
cacgatatggcggtcgatcccgccaagcgcgacgagttcatcacgcgcgatgaggacgtg
ctcgacacctggttctcctcggcgctgtggccgttctcgacgctcggctggccggacacc
gacaaggaggtgaagcgctattatcctacgagcgttctcgtcaccggcttcgacattatt
ttcttctgggtcgcccggatgatgatgatgggcctgcacttcatgaacgatgtgccgttc
ccgacggtctacatccacgcgctcgtccgcgacgagaagggcgcgaagatgtcgaagtcg
aaaggcaacgtcatcgatccgctgcatctgatcgacgaatacggcgccgatgcgctgcgc
tttacgcttgccgcgatggcggcgcagggccgtgatatcaagctcgccaccagccgcgtc
gagggttaccgcaacttcgcgaccaagctgtggaacgcctcgcgctttgccgagatgaat
ggctgcgcactggcgaaaggttttgatgccacgcgctgcaaggagacgttgaaccgctgg
atcgcacacgagacctcgcatgcgacgcatgaagtgaccgaggcgatccgcgcgtatcgc
ttcaacgatgcggcgggcgcgatgtatcgtttcgtctggaacgtctattgcgactggtat
ctcgaattggccaagcccgtgctgctcggcccggacagcgaggcgaagcgcgagacgcag
gcagcggttgcgtgggcgcgcgacgagatcctcaagctgctgcacccgttcatgccctac
atcaccgaggagctgtgggccgtcaccgctccgcgcgacaacgtgctggcgctcgccgca
tggccaattcagcccgacgacgagatcgcgctcgaagcctcgatgcaggcggcgatggcg
ggcgatccgcttgcggtgccggtgatgacgtcgtcggccttgaaggctgaggcgttctcc
gatccgaaggcggaagccgagatcggctggctgatcgatctcgtcaccgcgatccgctcg
gtccgtgccgagatgaacatcgccccggcgacgctgtttccgttgatcctcgtcaacgcc
tcgaaagagttgcaggcgcgcgcgcaacgctggagcgacgtcatcaagcgcatggcgcgc
gttgccgagatttcgttcgatgcggcggccccacaaggctcgcttcaattgctggtgcgt
ggcgaagttgcggcgattccgctcaagggcgtgatcgatctcgcggccgagaaaacccgg
ctcgaaaaagagctgggcaaggcggacgccgatatcgcgcgcgtcgatgccaagctcggc
aacgagaagttcgtcgctaacgcaccggaagaggtgatcgacgagcagcgcgagaagcgc
gaggaggcggtcacccgccgcaccaagatcgtcgaggcgatcgagcggctgaaggcggcg
gggtaa
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