Oryctolagus cuniculus (rabbit): 100339760
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Entry
100339760 CDS
T03373
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100339760
03015 mRNA surveillance pathway
100339760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100339760
03041 Spliceosome [BR:
ocu03041
]
100339760
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100339760
Spliceosome [BR:
ocu03041
]
Complex C
Other components
EJC/TREX
100339760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100339760
NCBI-ProteinID:
XP_002718204
Ensembl:
ENSOCUG00000002176
UniProt:
G1SGZ7
LinkDB
All DBs
Position
17:59631795..59638997
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AA seq
735 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGNLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEEMEETGNQHNDVEIEEAGEEEEKEVGVVHSDAEKEQEEEEQKQ
EVEVKMEEEPEVRESEKQQDSQPEEVMDVLEMVENVQNVIAEQEAMETNQVESTEPSENE
TSKELEPEMEFEVEPDKESKSLSPEKESVGALEIEKESEGKEEKEPEPQPEPVAQPQTQP
QPQPQIQTQPQPQLQPQSQPQPQLQPQTQPQPQSVLQPQPETLPAAVLQPPPQVIQEQGH
LLPERKEFPVESVKLTEVPIEPVLTAHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSS
SSSSSTSSSSGSSSSSGSSSSRSSSSSSTSTSGSSSRDSSSSTTSSSESRSRSRGRGHNR
DRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSS
RSERDRKSDRKDKRR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtagatgagaatatccgcaagctcaccgggcgagatcccaatgacgtgaggcccatc
caagccaggttgctggccctttctggtcctggtggaggtagaggacgtggtaatttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaagaagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagcgttgcagtcttcagttgtagctacctcc
aaagagcgtacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcaaaaatttaaacaggaatcc
actgttgccactgaaaggcaaaagaggcgccaggaaattgaacagaaacttgaagttcag
gctgaagaagagagaaagcaggttgaaaatgagaggcgagagctgtttgaagagagacgt
gctaaacaaacagaactgcggcttttggaacagaaggttgagcttgcacagctgcaagaa
gagtggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaagtggtgcgtaat
gaagagcagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagatggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaagaaaag
gaagtaggtgtagtgcatagtgatgcagagaaagaacaggaggaggaggaacagaaacag
gaagtggaggttaagatggaggaggaacctgaagtgagggaaagtgagaagcagcaggac
agtcagcctgaggaagttatggatgtgctggagatggttgagaatgttcaaaatgtgatc
gctgagcaagaggccatggaaacgaatcaagttgaaagtacagagccttcagaaaatgaa
actagcaaagagttagagccagaaatggaatttgaggttgagccagataaagaatctaag
tctctttctcctgaaaaagagagtgttggtgctctggaaatagagaaggagtctgaggga
aaagaagagaaagaacctgagccccagcctgagcctgtggcgcagcctcagacccagccc
cagccccagccccaaatccagacccagcctcagcctcagctccagccccagtctcagcct
cagcctcagctccagccccagactcagccccagccccaatctgtactgcagcctcagcct
gaaactttaccagcagcagttttacagccaccacctcaggttattcaggagcaagggcat
ttactccctgagagaaaggagtttcctgtagagtctgtaaagctcactgaggtgccaata
gagccagtcttaacagcacatccagaaagcaaaagcaaaaccaaaactaggagcagaagt
cgaggtcgagctagaaataaaacaagcaagagcagaagtcgaagcagtagcagtagtagt
tctagtagcagttcaaccagtagcagcagcggaagcagttctagcagtggcagcagtagt
agtcgaagcagttctagtagcagcaccagtacaagtggcagcagcagcagagacagtagc
agcagcactactagtagcagtgagagtagaagtcgaagtaggggccggggacataacaga
gatagaaagcacagaaggagtgtggatcggaagcgaagggatacttcaggtctagaaaga
agtcacaaatcttcaaaaggtggtagtagtagagatacaaaaggatcaaaggataagaat
tcccggtccgacagaaagaggtctatatcagagagtagtcgatcaggcaaaagatcttca
agaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgttaa
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