KEGG   Oryctolagus cuniculus (rabbit): 100339760
Entry
100339760         CDS       T03373                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03013  Nucleocytoplasmic transport
ocu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100339760
   03015 mRNA surveillance pathway
    100339760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100339760
   03041 Spliceosome [BR:ocu03041]
    100339760
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100339760
Spliceosome [BR:ocu03041]
 Complex C
  Other components
   EJC/TREX
    100339760
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 100339760
NCBI-ProteinID: XP_002718204
Ensembl: ENSOCUG00000002176
UniProt: G1SGZ7
LinkDB
Position
17:59631795..59638997
AA seq 735 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGNLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEEMEETGNQHNDVEIEEAGEEEEKEVGVVHSDAEKEQEEEEQKQ
EVEVKMEEEPEVRESEKQQDSQPEEVMDVLEMVENVQNVIAEQEAMETNQVESTEPSENE
TSKELEPEMEFEVEPDKESKSLSPEKESVGALEIEKESEGKEEKEPEPQPEPVAQPQTQP
QPQPQIQTQPQPQLQPQSQPQPQLQPQTQPQPQSVLQPQPETLPAAVLQPPPQVIQEQGH
LLPERKEFPVESVKLTEVPIEPVLTAHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSS
SSSSSTSSSSGSSSSSGSSSSRSSSSSSTSTSGSSSRDSSSSTTSSSESRSRSRGRGHNR
DRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSS
RSERDRKSDRKDKRR
NT seq 2208 nt   +upstreamnt  +downstreamnt
atggcggtcgcagtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtagatgagaatatccgcaagctcaccgggcgagatcccaatgacgtgaggcccatc
caagccaggttgctggccctttctggtcctggtggaggtagaggacgtggtaatttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaagaagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagcgttgcagtcttcagttgtagctacctcc
aaagagcgtacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcaaaaatttaaacaggaatcc
actgttgccactgaaaggcaaaagaggcgccaggaaattgaacagaaacttgaagttcag
gctgaagaagagagaaagcaggttgaaaatgagaggcgagagctgtttgaagagagacgt
gctaaacaaacagaactgcggcttttggaacagaaggttgagcttgcacagctgcaagaa
gagtggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaactaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaagtggtgcgtaat
gaagagcagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagatggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaagaaaag
gaagtaggtgtagtgcatagtgatgcagagaaagaacaggaggaggaggaacagaaacag
gaagtggaggttaagatggaggaggaacctgaagtgagggaaagtgagaagcagcaggac
agtcagcctgaggaagttatggatgtgctggagatggttgagaatgttcaaaatgtgatc
gctgagcaagaggccatggaaacgaatcaagttgaaagtacagagccttcagaaaatgaa
actagcaaagagttagagccagaaatggaatttgaggttgagccagataaagaatctaag
tctctttctcctgaaaaagagagtgttggtgctctggaaatagagaaggagtctgaggga
aaagaagagaaagaacctgagccccagcctgagcctgtggcgcagcctcagacccagccc
cagccccagccccaaatccagacccagcctcagcctcagctccagccccagtctcagcct
cagcctcagctccagccccagactcagccccagccccaatctgtactgcagcctcagcct
gaaactttaccagcagcagttttacagccaccacctcaggttattcaggagcaagggcat
ttactccctgagagaaaggagtttcctgtagagtctgtaaagctcactgaggtgccaata
gagccagtcttaacagcacatccagaaagcaaaagcaaaaccaaaactaggagcagaagt
cgaggtcgagctagaaataaaacaagcaagagcagaagtcgaagcagtagcagtagtagt
tctagtagcagttcaaccagtagcagcagcggaagcagttctagcagtggcagcagtagt
agtcgaagcagttctagtagcagcaccagtacaagtggcagcagcagcagagacagtagc
agcagcactactagtagcagtgagagtagaagtcgaagtaggggccggggacataacaga
gatagaaagcacagaaggagtgtggatcggaagcgaagggatacttcaggtctagaaaga
agtcacaaatcttcaaaaggtggtagtagtagagatacaaaaggatcaaaggataagaat
tcccggtccgacagaaagaggtctatatcagagagtagtcgatcaggcaaaagatcttca
agaagtgaaagagaccgaaaatcagacaggaaagacaaaaggcgttaa

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