Oryzias latipes (Japanese medaka): 101159474
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Entry
101159474 CDS
T02443
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101159474 (wdr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101159474 (wdr3)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101159474 (wdr3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
NBCH_WD40
ANAPC4_WD40
WDR54
WD40_like
RMC1_N
Utp21
Motif
Other DBs
NCBI-GeneID:
101159474
NCBI-ProteinID:
XP_004081424
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Position
21:complement(1602478..1623069)
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AA seq
940 aa
AA seq
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MGLTKQYLRYAPSAVFGVIGSQKANIAYVTLRGGERGRYVAVAACEHVFVWDVRKGEKVL
ILQGQKHEVSFLCPSPDGVHVAVGYEDGAVRIFSLLNGESSVAFNGHKTAVTVMNYDALG
ARLVTGSKDTDVIVWDIINECGLYRLRGHKDAITQALFLKNKNLMVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWALALLKQEKRLLTGSADSELRAWDIAALEEDKTEGGPKVKKGKT
LLEEDEDDEEEKEDESLDERILSCKKAGSILREARDRVVSMTTDSRARVVACHGNDSVLE
LFTVLTEEEVQRKMTKKMKKARKKAAKAQEEAGGAAAEPVVERTLKDEIVRLTNIKASAK
IRWADCLSGAGGELKVALLLQNNTVETYSLKTSDENPSANKTARLTLGGHRTDVRTLAFS
SDNLAVLSASGDTVKVWNRSTLQVIRTMTCEYALCSLFVPGDRQIILGTKSGKLQIFELA
SGSLLETSDAHDGAVWSLCLAPDQRGIVTGGADKTVKFWEFELIKDQSSAQKRLAVKHVR
TLQLEDDVLCVRFSPDHRLLAASLLDCTVKIFHSDTLKFFLSLYGHKLPVLCLDISHDST
LIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMFLQFVPKTHLFFTAGKDRKIKQWDADK
FELVQTLEGHHREVWCLAISPNGDHLVSASHDKSLRLWERTREPIILEEEREMEREAEFE
ESVAKGDAPVVPGEVEGEAAPAAKKTVETVKAAERIMEALELHREELRKMEEHKYACEGA
GKQLPPPKPNPVLVAFGNVSPARYVLDVIKAVRSSELEVSLLVLPFPYVPELLQLFSSYI
HQGLEVELVCRCLFFLLKIHFGQITSNQMLLSVIDDLHSVTVSKVCEIRDVMGFNSAALQ
FLQRQIESQENVTFFAEATGRLEEKKKRRRKRERAVLTIA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaccaagcagtacctgcgctacgcgcccagcgccgtgttcggcgtcatcggc
agccagaaggccaacatcgcatacgtgactctgcgcggcggggagagggggcgctacgtg
gccgtggccgcgtgcgaacacgtcttcgtctgggatgttcggaaaggagagaaggttctg
atcctgcaggggcagaagcacgaggtgagcttcctgtgcccctcccccgatggagtccac
gtcgccgtgggttacgaggacggggcggtgaggatcttcagcctgctgaacggggaaagc
agcgtcgccttcaacggccacaaaacggccgtcaccgtcatgaactatgacgccctcggg
gcgcggctcgtcaccggctccaaggacacggacgtgatcgtgtgggacatcatcaacgag
tgcggcttataccgcctgcggggtcacaaggacgccatcacgcaggccttgtttctgaaa
aacaagaacctcatggtcacgagctccaaagacagttttgtgaagtggtgggatctggac
acacagcactgctttaagaccatggtgggccatcgcagcgaggtgtgggctttggcgctg
ctgaagcaggagaagaggctgctgacgggctcggccgacagcgagctccgagcgtgggac
atcgccgccctggaggaggataaaacggaaggaggacccaaagtgaagaagggcaaaact
ttattggaggaagatgaagatgatgaggaggaaaaagaggatgagagtcttgacgagcgc
atcttgagctgcaaaaaggccggctccatcctgagggaagcccgagacagagtggtctcc
atgacgacggactccagagccagagtggtggcctgccatggaaacgattctgtgctggag
ctcttcaccgttctgacagaggaggaagtgcagagaaaaatgaccaagaagatgaagaaa
gccagaaagaaagcagccaaagctcaggaggaggcaggaggagccgccgctgagccggtg
gtggagcggacgctgaaggacgagatcgtccggctaaccaacatcaaggcttccgctaag
atcaggtgggcggactgcctgtccggtgcaggcggcgaactgaaggtggcgctgctgctg
cagaacaacaccgtcgagacgtacagcctgaagacttcagacgaaaacccctcggccaat
aagacggctcgcctgacgctgggcggccatcgcaccgacgtgcgcacgctggccttcagc
tcggacaacctggccgtcctctctgcctccggagacacggtcaaagtgtggaacaggtcg
accctgcaggtgattcgcaccatgacctgtgagtacgctctctgctcgctctttgtgccc
ggagacagacagatcatcctgggaacgaagagcgggaagctgcagatctttgagctggcc
tcaggcagcctcctggaaacgtcggacgcccacgatggagccgtgtggtccctctgtctg
gctccagaccagagagggatcgtcaccggaggcgcagacaagacggtgaagttctgggag
ttcgagctgatcaaagaccagtcgagcgctcagaagaggctggcggtcaaacacgtccgc
actctgcagctggaggacgacgttctgtgcgtgaggttctctccggaccaccggctgctg
gcggcgtctttgctggattgcaccgtcaagatcttccacagcgacacgctgaagttcttc
ctgtcgctgtacggacacaagcttcctgttctctgtctggacatctcgcatgacagcacg
ctcatcgccaccggctccgctgacagaaacgtgaagatttgggggctggactttggcgac
tgccaccgctccctgttcgctcacgacgacagcgtcatgttcctccagtttgtgcccaag
actcatctgttcttcacggcagggaaggaccggaagatcaagcagtgggacgccgacaag
ttcgagctggtccagacgcttgagggtcaccatcgggaggtctggtgtctcgccatcagc
cccaacggagaccacctggtgtcggcgtctcatgacaagtccctgcggctgtgggagagg
acccgggagcccatcatcctggaggaggagcgggaaatggagagggaggcggagtttgag
gagagcgtggctaaaggagacgcgcccgtggttcccggagaggtggagggggaggcggcg
ccggcggcgaagaagacagtggaaacggtcaaagcggctgagcgaatcatggaggctctg
gagctccacagggaggagctcaggaagatggaggagcacaaatacgcctgtgagggcgcc
ggcaaacagctccctcctccaaagcccaaccccgtcctggtggcgtttggaaacgtctct
ccggcccgctacgttctggatgtgatcaaggcggtgagatccagtgagctggaggtttcc
ctgctggtgcttccgttcccatacgtccccgagctgctgcagcttttcagcagctacatc
caccaggggctggaggtggagctcgtctgccgctgcctgttcttccttctcaagatccat
tttggtcagatcaccagtaaccagatgctgctgtccgtcatcgacgacctgcacagcgtc
accgtgtcaaaagtctgtgagatcagagacgtgatgggcttcaacagcgccgccctgcag
ttcctccagcgccagatcgagagtcaagagaacgtgacgttctttgctgaggccacgggg
cgactggaggagaagaagaagaggaggaggaagagggagagagccgtcctgaccatcgcc
taa
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