Oryzias latipes (Japanese medaka): 101161274
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Entry
101161274 CDS
T02443
Symbol
heatr1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101161274 (heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101161274 (heatr1)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101161274 (heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT
HEAT_2
Cnd1
DUF3385
Vac14_Fab1_bd
Arm
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
101161274
NCBI-ProteinID:
XP_023805335
LinkDB
All DBs
Position
19:21667080..21690252
Genome browser
AA seq
2128 aa
AA seq
DB search
MTSLAHQLKRLALPQSDLNLLTHREVASLLFDPKDAAAMDRSTFFALGCTGLEELLGFEP
AFLEFQDTLFSPSSVTLERSVQSREVNNKLDSGISLFLARLCPYFLLKPAHKCIEWLVHR
FHIQLYNADSLLACALPYHDTNIFVRVLQLLNIREPTNRWNWLHCLQKPGVPLSRGSLIM
HICTDLSFMDFICSMVTRSIQAFSGHSESFSQLRVIFSFYASTIVSALAATDRVSEHLMA
KLLPYIQTGLKSTLTDYKAATYMVVCQLAVKVVMERGVVNSLAVHISKSLLKEPALAKEG
LGCLIVLLQSQKDGAVGPRAVDHLCSVPSLASTLQVMATTHDVSPLLRYLLPQLISSAFS
AGEVEAGRLRVLESVLKSVPLNKDLDRTLARLLIDQYLSQSHGCVDMSVLDQLLLPLIRL
FENRYSEALDAVLAARVCTVSDPAQKQQFNRLLSLSRSSGKHQILGDSDVSLFLSLRHPE
PVVRRSALERLKDLVATEQMSLDEAFLKEAVLERLKDEAVEVVAAALTALQMLLAKLEPE
DCVSCLLSLVHRADVSGDESWLPVLTAAVRLLSDPQLLQKDDGLPERIVWGLLPFLVIVS
PQLDLPNAIAHSDVLAQHPLTHNWGQELHKMAKRSHDPNFVGVANERLASTLAKNLTDME
LFSKRDALDKLVLVVEQQLGSSLRARASFVVLTRTLLLSLDGLSETQHLFTAQRVYTLLE
APLLEVTRSGNNPEVERPASVPLSFSEAVTLCLSGCGQQEKGAVLVALLRDFICSLKRLD
VSLSGEGWWNPEKLDANTCCYLGLICRLFSIIISGAAEGQRADSFRELMKLLIQVHLGEP
DILFRFLSMLWGYDRNHGDQLDVKVGSVLQIQALYMGGVLLSTQPPAVLEELTNADSPVV
PSLLCCLTSPVREVRRSALGALQSLSEANNSPFQPITARLLKTSEEILADASYLSTALGV
LHKECLSGRAELQGLESSLQHLLRSIQTPGCPSYTASALLRALSLTNGQSILSGLLPVLD
RLLLQTEQDSSYLLQAETQLLQLILRKYNPESAPLLARDPKSLDLFTKALRLPSCQIPAL
EQISKHFFSALADEGVQQKLLSEMFNLLLESCSPAVMSSISGAFKAISVDAQLLANELAP
PEKPRVGVTVQQTRRTKTSQRKAQDNTSEGHEEGTVSWQKVTLILELLQHKKKLKRAQML
VPVLFSLLSRSLEPQAGNHGNMEYTKQLLLSCLLNICLKMVPQSAVTLDEEKFSVELVVQ
CIRASEMPQTHHQALLLLGAIAPIFPEKVLHNIMPIFTFMGASVMRLDDAYSFCVIDKTV
QMVIPALIQAYRLPDGSSSSHVVGVVTKVMHVFVDALPHVPEHRRLPILTQLVTTLGPTH
FLWVLLLLLLKLHATQSAAMQATPTASERDAALERDVDFWISMCCQFKVGDQLTSLIHTL
KFLLQLPDDKNDAAPKRAAVHRGAKKEAEKEEKVEELIFNVEAHSSKELRHFKFLSVSFM
AQLLGSSSFIQKVAEHTDEGEDDSQPPLQQLQQQLLEQNLCYIHSVARCVEDNADKHTAK
FWRVLLNKAYEVLDKVNALLPTDTFITVMRGLMGNQLASVRRKAMELLNNKLQTQTQWDE
TQVTVLLELISDLLSVVGKGQGSKDEQAEQTINRQTALYSLKLLCHRIGPHHQEAFVPVL
LRALEVTSAAHEEKNVTASALLCIAEVVSVLKALAIPQLPRLMPAVLQVLADRKELLTNE
TYLLSGVAALQRVIDTLPHFISPYLQDSTSQVCRLTRMVETSPSSSSSSSNQLRIRLAAL
RNTLATKLPSRVLLPTLSKCYSSLLDSRKDQLGVLMSIMKDHISQMETEQLSFHQSELTA
FFLTALDFRAGHCQDDLQKASEVEGGVIECLMTMVMKLSEFTFRPLFFKLCDWSTAGGPE
RRLTFFRLCDVMACRLKRLFVLFAPQLVKPLADVLRQTSGSDDLPFQSLEKNCLLLQLDL
DCLQKIFLYDSRCFLNRERADALLSPLVDQLENHLGGEQVYQQRVTQHLLPCLGQFSVAL
ADDSLWKTLNYQVLLKTRHSDSKVRFSSLLMLMELASRLKENYVVLLPETIPFLAELMED
ECEEVQQQVQRVVQEMEKILGQPLQSYF
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgctggcccaccagttgaagaggctcgctctgccgcagagcgacctaaacttg
ctcactcacagggaggttgcatcgctgctgttcgaccccaaagatgccgccgccatggac
aggagcaccttctttgccctgggttgcacagggctggaggaattgttgggatttgaacct
gccttcctggagtttcaggacactctgttcagcccctcctctgtaactttggagcgcagc
gtccagtccagggaggtcaacaataagctggactctggaatctcactcttcctcgcccgc
ctctgcccatatttcctcctcaaaccagctcacaagtgcatagagtggctggttcaccgc
ttccacatccagctgtataacgcggacagcttgctggcctgcgctcttccgtaccacgac
accaacatcttcgtcagagtcctgcagctcctgaacatcagggaacccaccaaccgctgg
aactggctccactgtctgcagaaaccaggcgtacccctctccagggggtctctgatcatg
cacatctgcactgacctgagcttcatggacttcatctgctccatggtgactcggtccatc
caggccttttcgggacactcggagagtttctctcagctgcgagtgatcttctctttctat
gcctccaccatcgtctccgccctggctgccacggacagagtgtctgagcacctcatggcc
aagctgctgccctacatccaaacgggtctcaagtccaccctgacggattacaaagcggcc
acctacatggtcgtgtgccagctggcggtgaaggtggtcatggagaggggagtggtcaac
agcctcgccgtccacattagcaagtcgctgctgaaagagcccgccctcgccaaagaaggg
ctgggctgcctgattgtgctgctgcagagtcagaaggatggcgctgttggtcccagagcc
gtggaccacctctgctccgtgccgtcgttggcctccacgctgcaggtcatggcgacgact
cacgatgtcagtcctctgctgcggtacctgctgcctcagctgatcagcagtgcgttcagc
gcaggtgaggtggaggctggccggctgcgtgtgctggagtctgtcctgaaatctgtccca
ctgaacaaagacctggaccggactttggctcggctgttgatagaccagtatctgagtcag
agccatggctgtgttgacatgtctgtcctggaccagctgctgctgcctctcatcaggctg
tttgagaacaggtactctgaggccctggacgccgtcctggctgctcgcgtgtgcactgtc
agcgatccggctcagaagcagcagttcaatcgactgctgtctctgtccaggagcagtggg
aaacaccagattctgggcgactcggacgtgtcactgttcctcagcctgagacacccggaa
cccgtggtccgaaggtcggcgctggaacgtctaaaggacttggtggctacagaacagatg
agtctagatgaagcctttctgaaagaggcagtcctggagcgcctgaaggatgaggccgtg
gaggtggtggctgctgcccttacagcgctgcagatgctcttggccaagttggagcctgag
gactgtgtatcatgtctgctgtctctggtgcacagagccgatgtgtccggggatgagagc
tggctgccggtgctgacagctgcagtacggttactgtctgacccgcagctcctgcagaaa
gacgatgggcttccggagagaatagtttgggggctgctgcccttcctggtcatcgtctcg
cctcagctcgacctcccgaacgccattgctcactccgatgtcctcgctcagcaccccctc
acgcacaactggggtcaagaacttcacaaaatggcaaagaggagccatgaccccaacttt
gtgggtgtggctaacgagcgccttgcctctacactggccaaaaacctgaccgacatggag
ctcttttctaaacgagatgctcttgacaaactagtcctggttgtggagcagcagttgggc
tccagccttagggccagggcctcctttgtggttctgactcggactctgctgctcagcctg
gacggcctgagtgagacccagcaccttttcactgcccagagagtatacacgctcctggag
gcccccctgctggaagtgaccagaagcggtaacaaccctgaagtggagcgtcccgcttct
gtcccgctgtccttctctgaagctgtgactctgtgcctgagtgggtgtggccagcaggag
aagggggcggttctggtggctctactgcgtgacttcatctgctctttgaaacgtctggat
gtttccctcagcggtgaaggctggtggaatccggaaaagctagatgcaaacacctgctgc
tacttgggtctgatatgccgcctcttcagcatcatcatcagtggggctgctgaggggcaa
agagccgactccttcagagagctgatgaagctgctcatccaggtccaccttggagaaccg
gacattctcttcaggttcctgtccatgctgtgggggtacgataggaaccatggagaccag
ctggatgtgaaggtggggtcagtcctgcagatccaggctctctacatgggtggagttctg
ctcagcacacaaccaccagcagtgctggaggagttaacgaatgcagactctcctgtggtt
ccctcgttgttgtgttgtctcacctctcctgtccgtgaagtccggaggtcagcccttggc
gctctacagagcctatcagaagccaacaactctccattccagccaatcacagcgaggctc
ctgaagacctcggaagagatcctggccgatgcctcctacctaagcacggctcttggcgtt
ctccacaaagagtgtttgtctggcagagctgagctgcaagggttggagtcatccctgcag
catctcctgcggagcatccagacacccggctgtccgtcgtacaccgcctctgcactcctg
cgagcgctgagcctcaccaatggacagtccatcctgtccggcctgcttcccgttctggac
cggctcctgctgcagaccgaacaggacagctcctacctactgcaggcggagacccagctg
ctgcagctgatcctgaggaagtacaacccggagtctgcaccactgttggctcgcgatccg
aaaagcctggacttgtttaccaaagctctgaggctccctagctgccagatcccggctctg
gagcagatcagcaagcacttcttctcggcactggcagacgagggggtgcagcagaagctg
ctgtccgagatgttcaacctgcttctggagagctgcagtccagcggtgatgagcagcatc
agcggcgccttcaaagcgatttccgtagatgctcagctcttggccaatgagcttgctccc
ccagagaagcccagagtgggcgtcacagtccagcaaacccgacgaaccaaaacctcccaa
agaaaagcccaggacaacacttctgaggggcatgaagagggcactgtgtcgtggcaaaag
gtgaccctcatcctggagctgctgcaacataagaagaagctgaagagagcccagatgttg
gtgccggttctgttctctctgctgtccaggagtttggagccccaagcaggtaaccacggc
aacatggagtataccaagcagctgctcctcagttgcctgcttaacatctgcctaaagatg
gtgccgcagtccgcagtcacgctggatgaagagaagttcagcgtggaactggtggtccag
tgcatccgggcgtcagagatgccccagactcaccatcaggccctgctgctgctcggcgcc
atcgcccccatcttccctgagaaggtcctgcacaacatcatgccgatcttcaccttcatg
ggggccagtgtgatgcgcctggacgacgcctacagcttctgcgtcatcgacaaaacggtg
cagatggtgattccagcgctcatccaggcgtacaggcttcctgatggctcctcctcctcc
cacgtggtcggcgtggtgacaaaggtcatgcacgtgtttgtggacgccttgcctcatgtt
cctgagcaccggcggctgccaattctcacccagctggtgaccacgctgggccccacccac
ttcttgtgggtgctgctgcttctgctgttgaagctgcacgccacacaaagtgcggccatg
caggccacgcccaccgccagtgagagagatgcggccctggagcgagatgtggacttctgg
atttcgatgtgctgtcagtttaaagttggcgaccagctgacctcactcatccacaccctg
aagttcctgctgcagctgcccgacgacaagaacgacgcggcgccgaagagagcagctgtt
catagaggagccaaaaaggaggcagaaaaggaggagaaggtggaggagctgatcttcaac
gtggaggctcacagcagcaaggagctccgtcacttcaagttcctgtcggtctccttcatg
gctcagctgctcggctccagcagcttcattcagaaggtggccgagcacacagatgaaggg
gaagacgacagccagccacctctgcagcagctgcagcagcagctcctggagcagaacttg
tgttacatccacagtgtggctcgttgtgttgaggacaacgctgataaacacactgccaaa
ttctggagagttcttctgaacaaagcatacgaggttctggataaggtgaatgcgctgctg
cccacagacaccttcatcacagtgatgcgggggctgatgggtaatcagctggcgtctgtg
aggaggaaggccatggagctgctgaacaacaagctgcagacgcagacgcagtgggacgag
acgcaggtgaccgttctgctggagctgatcagtgacctgttgagcgttgtgggtaaaggt
caagggtcgaaggacgagcaggcggagcagaccattaaccggcagactgcgctctacagc
ctgaagctgctctgccaccgcatcggcccccaccaccaggaggctttcgtgcccgtcctg
ctgcgtgcgctggaggtcacctcagcggcccacgaggagaagaacgtgaccgccagcgct
ctcctttgcatcgcggaggtggtcagcgttctgaaggctctcgccattccacagctgccc
aggctgatgcccgccgtgctgcaggtgctcgctgacaggaaagagctcctgaccaatgag
acgtacctgctgagcggtgtcgctgctcttcagcgcgttattgacactctgccacacttc
atcagcccctatctgcaagactccacctcacaggtgtgtcgactcacgcgcatggtggag
acctccccttcctcctcatcctcctcctccaatcagctccgcattcgactggctgcactg
aggaacactctagccaccaaactgccctccagggttcttctgcccacgctctccaagtgc
tacagcagcctgctggacagcaggaaggatcagctgggggtgctgatgagcatcatgaag
gaccacatcagccaaatggagacggagcagctcagcttccaccaatcagagctcaccgcc
ttcttcctcaccgcgctggacttccgcgccggacactgccaggacgaccttcaaaaagca
tcggaggtggagggcggagtcatcgaatgtctgatgaccatggtgatgaagctgtctgag
tttacgttcaggcccctcttctttaagctgtgtgactggagtacagcgggcggtccagag
cggcggttgacctttttccggctgtgtgacgtcatggcttgccgcctgaagcgccttttt
gtgctgtttgcccctcagctggtcaaacctttagccgacgttctgcgacaaacgagcggc
tcagacgacttgcccttccagagcttggaaaagaactgcctgctgctccagctggacctg
gactgtctccagaagatcttcctgtacgactccaggtgtttcctgaaccgggagcgggcc
gacgccctgctgagcccactagtggatcagctggagaaccacctggggggtgagcaggtc
taccagcagagggtgacccagcacctgctgccctgcctggggcagttctcagtggcgctg
gctgacgactctctgtggaagaccctgaactaccaggtcctcctgaagaccagacacagt
gactctaaggtgcgtttctcctccctcctcatgctcatggagctggcatccagactgaag
gagaactacgtggtcctcctgccggagaccatcccattcctggctgagctcatggaggat
gaatgtgaggaggtgcagcagcaggtccagagagtcgttcaggagatggagaagatcctg
ggacagccgctgcagagctacttttaa
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