Oryzias latipes (Japanese medaka): 101163596
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Entry
101163596 CDS
T02443
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X3
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101163596 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101163596 (nfrkb)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
101163596 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
101163596
NCBI-ProteinID:
XP_004076478
LinkDB
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Position
14:complement(13823345..13834367)
Genome browser
AA seq
1273 aa
AA seq
DB search
MDSLSQMMTGHLDPKEGNDGVITEECMLGNCRVSLPEDLLEDPDIFFSVLSKNTWNEVLT
DSQRQHLRHFLPQFPDNNPEEQDSTIADLFNNRNFHFGNPLHLAQKLFRDGYFNPEVVKY
RQLCAKSQKKRHLHALQQYYHKLLKQILVSRKELLDFAVQNGLDFPPKRRLPNKTQAEMR
ETRVRRRWSHILKEVKTECGDSIVSSDDEEMALWTQTPQSPSSPSSTVSLRVLPTLSTQD
MKTSEKVELSQLDLKVMLQNHCEKRKRQPDHPDLITSDIQLRDILSRSNIGRKGTMPLFD
LSLPKKKIRDEKRRKKLRTIKTEAEDPCESLPLSEALSAPPAHISGSLPEAPCTPQAIIK
EEVVEDCQSSPGAVEEITTSFFSLLESIFRTEGLASTLMLEEKVQMWQMCPASSHNPWFS
FASCWSDLVLQALQFLAGETKDGMMALPSGFFPFVEFVDECQQWRWIGPTQDTEKDLGAL
CQLWLDSKDFVVKTESEDISEMMSPIPKLSTDYVVRPSTGDERQVFQIQEQQRYNEPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRHRS
QEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKDGGGKTPGSVEPGQDVSSNPMSPI
SATLTPNTPGTPKSPLPFTASTPTKTGVPDAVKTSPGVLLVSPPSLPQLGTILPTSQACP
PASQPVSSQHTARIVSHLAASSLPQVRVVAAQPALAPSAASQQTTLVHQTPHQIRVPVSV
AAKGISQAVVSVPLRSQSGTSPVQVPTTLSMSAVTVTKPQTGSPGSPANKPASPAVLQGV
TSSNIKQVSITGQLGMKTPGSAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITP
DMMATLAKSPVATVKLTSDFLGSASAGSKSISATLHVTPPHLSPSSASSAPPCMGETQTT
KAGPISSTVLKAAGDTAIRLMPTLAVNVADQKSRTFSSDKSATIRIMPGLGVIPQKQGQT
ITMTTSTGNKPLPVPTCANVVTMAAGVATVTKSITVAPGVSAAPLTLATATAAVRQVPGA
VVTTQAGKLPARITVPLSVLNQPLKTKSVVTTPIVKGSINTNISSLGRNIILTTMPAGTK
LIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTIPTQQLQQHIATGSPKSLSTVVVTTAPS
HKPAPDPPPAPQN
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggattcactttctcaaatgatgactggtcaccttgatccaaaagaggggaatgatggg
gtgatcacagaggagtgcatgcttggaaactgcagggtgagccttccagaggatctcctt
gaagatcctgatatttttttctctgtgttgagtaaaaacacgtggaacgaagtactcaca
gattctcagagacaacacttgcgacactttttgccacagttccctgacaacaaccctgaa
gagcaggacagcaccatcgctgatctgttcaacaacagaaattttcattttggaaatcct
ctacatcttgcacaaaagctgttcagagatggttacttcaatcctgaggtggtgaagtac
agacaactatgtgccaagtctcagaagaaacgccacctgcacgcccttcagcagtattac
cacaaactgttgaagcagattcttgtctccagaaaggagctgctggattttgccgttcag
aatggtttggactttccaccaaaaagaaggctgccaaataagacgcaagctgaaatgagg
gagacgagggtgagaagaagatggagccacatacttaaagaggtcaaaacagagtgtgga
gacagcattgtatcctctgacgatgaagaaatggcgttatggacccagactcctcagtcg
ccttcctctccgtcttccaccgtgtcgctcagagttcttcccaccctctccacccaagac
atgaagacctctgaaaaagtagaactgagccaactggacttgaaagtcatgttgcaaaat
cattgcgagaaaagaaagcgccagcctgaccaccctgacctgattacctctgatatccag
ctgagagacatcctttccagatcgaacattggtcgaaaagggaccatgccactttttgat
ctgtctctgcccaagaagaagataagagatgagaagcggaggaaaaagttgagaacaata
aaaacggaggctgaagatccctgtgaaagtctgcccctttcagaagccctttcagcccca
ccagcacacatcagtggctctctgccagaagccccctgcacgccacaagccatcatcaag
gaggaggttgtggaggactgccagagcagccctggagctgtggaggaaataactacgagt
ttctttagcttgttggaaagcatctttagaacagagggtcttgccagcacgttaatgttg
gaggagaaggttcaaatgtggcaaatgtgtccagccagctcccacaatccctggttttcc
tttgcttcatgctggtctgacctggttcttcaagcactgcagtttctagcaggagagact
aaagatggcatgatggcgctcccgagtggattttttccctttgtggaatttgttgatgaa
tgtcagcagtggagatggatcggacccactcaggatacagagaaggacctcggtgcactc
tgtcagttatggctggactctaaagattttgttgtcaaaacagaaagtgaagacatttca
gaaatgatgtctccaataccaaaactatctactgattatgtcgtgaggccgagtactgga
gatgagagacaggtgtttcaaattcaggagcagcagcgatacaacgagccacacaaagcc
ttcaccttcaggatgcacggctttgaatcggtggtgggtcctgttaaaggcgtgttcgat
aaggagatgtctctcaacaaagccagagagcacaccctgcttcgctcagaccgcccacca
tacgtcaccattctctctctggtgcgggacgcagcagccaggctacccaatggagaagga
acaagggcggaaatctgcgagcttctgaaagactcgcagtttcttgccccagatgtcaca
agtgcacaggtgaacacagttgtgagtggggcgctggacagacttcattatgagaaagac
ccctgtgtgaagtacgacattggtcgcaaactgtggatttacctgcatcgccatcgcagt
caggaggagtttgagagaatccatcaggctcaagccgcagctgcaaaagcaagaaaagct
cttcaacagaagcctaaaccagcttcaaagcctaagtctggaagcaaagatggaggtgga
aaaacccctggaagtgtagagccagggcaggatgtgagctctaaccccatgtctcccatc
tctgcaactctcaccccaaacacacctgggacacccaagtcccctctacccttcacagcc
tccacacccacaaagaccggagtcccggacgcagtcaaaaccagcccaggagttctgctt
gtgtcccctccatcactgcctcagcttggaaccatcttacccacaagtcaggcttgtcct
ccggcctcacagccggtttcgtcccagcacacggcccggatagtaagtcacctggctgcc
agctccctcccacaggtgcgggttgttgctgctcagcctgctctggcgccttcagctgca
agccagcagaccactctggtgcaccagaccccacaccagatccgggtgcctgtgtctgtg
gcggccaagggcatttcacaggcagtggtttctgtgcctttacgaagtcagtccggtacc
agtccagtgcaggttccaaccactttgtccatgtcagctgtaaccgtaacaaaacctcaa
actggatctcctggcagccctgctaacaaaccagcatctccagcggtgctgcagggagtc
accagctccaacatcaaacaggtttccatcaccggacagctgggaatgaaaactccaggc
agtgctggaattccaataactgccacaaacctgcgcatccagggtaaagatgtcctgcgt
cttccaccctcctccatcaccacagatgccaaagggcagactgtgctgcggatcaccccg
gacatgatggccactctcgccaaatcgccagtcgccaccgtcaaactcacttctgatttc
ctgggctctgcctctgcgggcagcaagagcatatcggccactctccacgtgacgcctccc
cacctttcaccttcctccgcctcgagtgctcccccctgcatgggggagacccaaaccacc
aaagcgggccccatttcctccaccgtgctgaaggctgcgggagacacggctattcgtttg
atgcccacattagccgtcaacgtggccgaccagaaatctcgaactttctcctcagacaag
agtgccactatccggatcatgccaggcctcggggttataccacaaaagcagggtcagact
atcacgatgaccacctccaccggcaacaaacctctgccagtgcccacctgtgccaatgtg
gtcacaatggctgccggtgtggcgactgttactaagagcatcaccgtagcgcctggagta
tctgccgcccccctgacgcttgcaacagcaactgcagcggtgcgacaggttcctggagct
gtggtcacgacacaagcgggaaagttaccagcacgcatcactgtgcctctctctgtcctc
aaccaaccgctgaagaccaagagcgtcgtaacgacaccaatcgtgaaaggaagcattaat
acaaatatcagtagcttgggcagaaacatcatcctgaccacgatgcctgcaggcaccaag
ctcatagctggaaacaaaccggtcagttttgtcacagctcaacagttccagcagcttcag
cagcaaggacaggccacacaggttcggattcaaacaatcccgactcagcagctccagcag
cacatagccaccggatctccgaaatctctgtcaacagttgttgtcacgacagccccttcc
cacaaacccgcacctgatcccccacctgccccccagaactga
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