Oryzias latipes (Japanese medaka): 101167424
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Entry
101167424 CDS
T02443
Symbol
glb1
Name
(RefSeq) beta-galactosidase isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00052
Galactose metabolism
ola00511
Other glycan degradation
ola00531
Glycosaminoglycan degradation
ola00600
Sphingolipid metabolism
ola00604
Glycosphingolipid biosynthesis - ganglio series
ola01100
Metabolic pathways
ola04142
Lysosome
Module
ola_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
101167424 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
101167424 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
101167424 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
101167424 (glb1)
00511 Other glycan degradation
101167424 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101167424 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101167424 (glb1)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
101167424 (glb1)
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101167424 (glb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
101167424
NCBI-ProteinID:
XP_004085513
LinkDB
All DBs
Position
1:complement(15303341..15310096)
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AA seq
653 aa
AA seq
DB search
MRLILSLLRLSFLLTVLSVQRLWAAPSFSLDYNADCFRKDGQRFRFISGSIHYSRIPRVY
WKDRLVKMYMAGLNAIQTYIPWNYHEESPGMYNFSGDRDVEYFLKLAQDIGLLVILRPGP
YICAEWEMGGLPAWLLSKKDIVLRSSDPDYVAAVDTWMGKLLPMMKPYLYQNGGPIITVQ
VENEYGSYFACDYNYMRHLTKLFRSHLGEDVVLFTTDGAGLNYLKCGAIQGLYASVDFGP
GSNITAAFEAQRHAEPHGPLVNSEFYTGWLDHWGSRHSVVSPDLVAKSLNQQLAMGANVN
MYMFIGGTNFGYWNGANSPYSAQPTSYDYDAPLTEAGDLTEKYFAIREVIRMYRRIPEGP
VPPSTPKYAYGAVTMKKLQTVADALEILSFSGPVKSTYPQTFIDLNQAYGYVLYRTTLPV
TCSEPTPLSSPLNGVHDRAYVSVDGVAAGILERNKVISINVTGKAGSQLDMLVENMGRIN
YGKGINDFKGLVSNLTLGKDTLTGWTMYGLSIDDAVSQGRLGETPSAWANPPQPASLSTP
AFYGGSFIIPDGIPDLPQDTYIKLPNWRKGQIWINGVNLGRYWPARGPQMTLFVPVNLLS
TAAPNNVTVLELEGASCNPQPCTVEFSATPILNATVQSEDEQHRRLFAKEDLL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagactgatcttgtctttgttgagacttagcttcctgcttacggtgttgtctgtacaa
cggctctgggcagcaccttcattcagcctggactataacgctgactgcttccgtaaagat
ggccaaaggttccgcttcatttcaggaagcatccactacagcaggatccccagagtctac
tggaaagaccgactggtgaagatgtacatggccgggctgaacgccatccagacgtacatt
ccctggaactaccacgaagaatctcctggcatgtacaattttagcggggacagggatgtg
gaatacttcctgaaactggcccaggacatcggcttactggtcatccttcggccaggaccc
tatatatgcgcagagtgggagatgggcggcctgccagcctggcttctcagtaagaaagac
attgtgctgcgatcttctgatccagattacgtggcagctgtggatacatggatggggaag
ttgttgcccatgatgaagccctacctctatcagaacggcggccccatcattactgttcag
gtggagaatgaatatggcagttactttgcctgtgactacaactacatgcgccacctgacc
aagctgttccgctctcacctgggggaggacgtggttctgttcaccacagatggcgctggc
ctgaactacctgaagtgtggcgccatacagggcctgtatgcctctgtggactttggtcca
ggttcaaatataactgcagcctttgaggcacagcgccatgctgagcctcatggacctttg
gtcaactcagagttttacactggctggttggaccactggggatctcgtcactcggttgta
tccccagatttggtggccaagtccctcaaccagcagctggcaatgggagcaaatgtcaac
atgtacatgttcataggtggaacaaactttggctattggaatggtgctaactcaccttac
agtgcacagcccacaagctatgactatgacgctccgctgacggaggcaggtgacctgacc
gaaaaatactttgccatccgagaggtcatcagaatgtatcggagaatcccagagggacca
gttccaccgtcgacccccaaatacgcatacggggccgttaccatgaagaagctgcagaca
gtagcggacgctctggaaatcttgtctttctctggtcctgtcaaaagcacgtatcctcag
actttcatagatttaaatcaggcttatgggtatgttctttacagaaccacattgcctgtg
acctgcagtgagcccacgcccctgtcatctcctctaaatggggttcacgacagggcgtat
gtttctgtagatggggtggctgcaggaatccttgaaaggaacaaagtcataagcatcaat
gtgaccgggaaagctggcagtcagctggacatgctggtagagaacatgggccggatcaac
tacgggaaaggcatcaacgacttcaagggtttggtgtccaacctgaccttgggcaaggat
acactcactggctggaccatgtatggtctcagcatagatgatgctgtcagccagggccgt
cttggagaaacaccttctgcatgggcaaaccctcctcagcctgcctctctgtccacacca
gccttctatggaggaagcttcataattccagacggcatcccagacctcccccaagacacc
tacatcaaactgcccaactggaggaaggggcagatctggattaacggtgttaatttggga
cgttactggccggctcgagggcctcagatgacactctttgtgccggtcaaccttctcagc
acagctgcacccaacaacgtgaccgtcctggagctcgaaggggcttcctgcaatccccag
ccgtgcactgtggagttctctgccactcccatccttaacgccacagtccagtccgaggat
gaacagcacaggagactctttgcaaaggaagatttactttga
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