Oryzias latipes (Japanese medaka): 101167997
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Entry
101167997 CDS
T02443
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
101167997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101167997
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101167997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
101167997
NCBI-ProteinID:
XP_020568090
LinkDB
All DBs
Position
20:3488505..3745432
Genome browser
AA seq
1994 aa
AA seq
DB search
MAGCVFPMGPESFQRFTPDSLAAIEQRIAQEEARRKKHYQEDLGDVELPRPRPDLEAGKQ
LPRIFADIPPHLLGVPLEDIDPFYFKDKRTFIVLNKGKAIFRFSATSALYIFSPFHPIRR
LAIKILVHSLFSLFIMCTILTNCCFMAMSEPTPWAKYLEYTFTGIYTFESLIKILARGFC
VGPFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQAVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVRTTAHCINGTLPTNTSFYCNN
KTWTSIKEFTEDEDNYYKVEGAKDALICGNSSDAGKCPDGFECLKAGRNPNYGYTSFDTF
GWAFLSLFRLMTQDYWENLYHQTLRSAGKTYMVFFVVVIFLGSFYLINLILAVVAMAYEE
QNQATIAEACQKEKEFQLAMEILKKEQQIAVQKTVESDARTSLDASPFGPPLDSLEERRR
SQALMGVADSDANLSDEKLLQVDITDGGKSLHPFLARSFSTRTRRGSQVSSIFNFRLRSR
GSEGEMADDEYSVPGDVEGVRSRTYSGGTFSGILPQPWSKRRLSTFSTASKNSQVFYPTL
NINGKLFVAVDQNGVSPAPLQGQLPACTMEKVKEESVSPVPTSTTELSTMLLPRPSSTNG
SERRGRAPSATSYLTDAMEELEESHKKCHPCWYVFAHQYLVWECSPCWLRLKQLVKIMVT
DPFLDLAITVCIVLNTLFMAMEHYPMTEEFNGMLTIGNLVFSGIFTAEMVLKVIALDPYY
YFQTGWNIFDSIIVCLSLMELGLSDVEGLSVLRSFRLLRVFKLARSWPTLNTLIKIIGNS
IGALGNLTLVLAIIVFIFAVVGMQLFGKNYQDCVCKISKDCSLPRWHMKDFFHSFLIVFR
VLCGEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVLLNLFLALLLSSFSSDNLSAPDDD
GEMNNLHIAIHRITRGLAWLRRQVVDFFNGNLKRRRQKRKEAKAMMKLKRLSTIHTEVNG
AVIGRHVEKYVVPEDDSYMTNPDLTISVPIAPGESDTEFPEEEEEEEEEEGEGEEVQSEG
EEGEVELEEQKDDISLSEGSTVDLRKPGEEEDEYSELAEEAMDPDNCFPDVCVSRFQCCD
IDTTAGLGKIWWRLRKTCFQIVEHSWFESFIIFMILLSSGALAFEDIYIEQRRMVKVVLE
FADKIFTYIFILEMILKWLAYGFKKYFTNYWCWLDFFIVDVSLVSLAANMLGYSDFAAIK
SLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
GRCVSRSGYIHDFREINNKSECEAKNDTSQYYWTKVKVNFDNVGAGYLALLQVATFKGWM
DIMYAAVDSRAVEEQPVKEINLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKRKLGG
QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNTLQGFFFDLVGKQAFDIIIMVLILFNM
ITMMVETDEQSPQMEKILYHVNLAFIVVFTIECLIKIVALRCYFFTIGWNIFDFVVVILS
IVGIVLADIIEKYFVSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGL
LLFLVMFIYAIFGMANFAYVKRQAGIDDMFNFETFGNSMICLFQITTSAGWDSLLSPILN
NSPEECDANIPHTGTTVRGNCGNPSVGITFFVTYIIISFLIVVNMYIAIILENFSVATEE
STEPLSEDDFEMFYEVWEKFDPEATQFIEYAKLSDFADALSEPLRIAKPNRIKLISMDLP
MVSGDKIHCLDILFAFTKRVLGESGEMDALKQQMEEKFMMANPSKISYEPITTTLRRKQE
EVSATIIQRCYRRHLMIRQVKAASYLYRQITTPQHATEDGEALSEVIFGDDAPEKEGLIA
TMMKENYVSSLLRIERSTTISSPSSPPSYNSVTRAASEIYHPLAVKTETVVETSAEELSN
QSAVQPKTQTDTEP
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atggctggctgtgtgtttccaatgggaccagagagctttcagcgcttcacgccggactcc
ctggcggccatcgagcagcgcatcgcccaggaggaggcccgacgcaaaaaacattaccag
gaggacctgggcgatgtggagctccccagaccccggcctgacctggaggcggggaaacag
ctgccacgcatcttcgctgacatccctcctcatctgttgggcgttcccctggaagacatc
gacccgttctacttcaaagacaagaggactttcatagtcctgaacaaggggaaggccatc
tttcgtttcagtgccacgtcagccctctacatcttcagccccttccaccccatccgcaga
ctggccatcaagatcctggtccattcattattcagtctcttcatcatgtgcaccatccta
accaactgttgcttcatggccatgtcagagccgacgccctgggccaaatacctggaatac
accttcacaggtatctacacctttgagtcactaataaagatcctggccagaggattctgt
gtggggcccttcaccttcctgagggacccttggaactggctcgacttcagtgtcattgtg
atggcatatgtcactgagtttgtggacctgggtaatgtgtcagctttaaggacgttcagg
gtgctgcgcgcgctcaaaaccatctctgtgatcccaggcctgaagacgattgttggcgct
ctgattcaggcggtgaagaaactggccgatgtgatgatcctgacggtcttctgcctgagc
gttttcgccctcatcggcttacagctcttcatgggaaatctgcggcagaaatgcgtccgc
accacagcacactgcatcaacggcacactgcctaccaacacctccttctactgcaacaac
aagacctggacctcgataaaggagttcactgaagatgaagataactactacaaggtggaa
ggggccaaagatgccttaatatgtgggaacagcagcgatgcggggaagtgtccagacggg
tttgaatgtcttaaagcaggaagaaacccaaactacggttacaccagctttgacacgttt
ggctgggccttcctgtccctgttccgtctgatgactcaggactactgggagaacctttac
caccagaccctgcgctccgccggcaagacatacatggtgttctttgtcgtggtcatcttc
cttggctccttctacctgatcaacctcatcctggctgtggtcgccatggcgtacgaggag
cagaaccaggcaaccattgctgaggcctgccagaaggagaaggagttccagctggccatg
gagattctcaaaaaagaacaacagattgctgttcagaaaacagttgaatctgacgctcgg
acgtctctcgatgcctcaccctttggcccaccactggacagcttggaagagcgaaggcgg
agccaagcgctgatgggtgttgctgactcagatgcaaacttatcagatgaaaagcttctg
caggtggacattacagatggggggaagtccctccatcccttcctcgcccgctccttctcc
accaggactcggagaggaagtcaggtctcctccatttttaactttcgcctgaggagccgc
gggtctgaaggagagatggccgacgatgagtacagtgtcccgggggatgtggaaggagtc
aggagtcgcacatacagtggaggaaccttcagtggcattctgccccagccgtggtccaaa
cgacgactaagcaccttcagcacagccagcaagaactcgcaggtgttttatccaactctc
aacatcaacgggaagttgtttgttgctgtggatcagaatggggtttctccagcgccactg
caggggcagctgcccgcctgcaccatggagaaggtcaaggaggagagtgtgagtccggtc
cccacgtccaccacagagctcagtaccatgctgctgcctcggccttcatccacaaacggc
tcggaaaggcgaggaagagcaccgagcgcaaccagctacctcacagatgccatggaagag
ctggaggagtcacataagaaatgccacccctgctggtatgtttttgctcaccagtacctg
gtgtgggagtgctccccctgctggctgaggctgaagcagctagtgaagatcatggtgacg
gaccccttcctggacctggccatcacagtgtgcattgtgctgaacacgctcttcatggcc
atggagcactaccccatgacggaagaattcaacggcatgctcaccatcggaaacctggtt
ttctctggaatcttcacagcagagatggtgcttaaggtcatcgctctggatccgtactat
tacttccagactggctggaacatctttgacagcatcatcgtgtgcctcagcctcatggag
cttggcctgtcggacgttgaaggcctcagtgtgctgcgttcatttagactgttgcgtgtc
ttcaagctggcacgttcatggccaactctcaacaccctaatcaaaatcatcgggaactct
ataggtgctctcggtaacctgacgctcgtcctcgccatcattgtctttatttttgccgtg
gtgggcatgcagctgtttggaaaaaactaccaggactgtgtctgtaagatctcgaaggac
tgcagtcttcctcgctggcacatgaaggactttttccattccttcctcatcgtcttcagg
gtgctgtgcggcgagtggattgagaccatgtgggactgcatggaggtggcggggcagcca
ctttgtatcctcgtcttcatgttggtcatggtcattggaaacctggtgctgttgaacctc
ttcctggctctgctcctcagcagtttcagctccgacaacttgtctgctcctgacgacgac
ggcgagatgaataacttgcatatcgccatccacaggatcacaagaggcctggcctggttg
cgcagacaggtggtggacttctttaatgggaacctgaagcgccgccgtcagaaacggaaa
gaggccaaagctatgatgaagctgaaacgcctaagcaccatccacacagaggtcaacgga
gcagtgatcggtcgtcatgtggagaagtacgtagttccagaagacgacagctacatgaca
aaccctgacctgaccatcagcgtccccatcgctcccggagagtcagacaccgagttccct
gaagaagaggaggaggaggaggaggaagaaggagagggcgaggaggtgcagagtgaaggc
gaggaaggagaggtggagctggaagagcagaaggatgacatcagcctgtctgaggggagc
actgtagacctgaggaaacctggggaagaggaggatgagtactcagagttggctgaagag
gcaatggaccccgacaactgcttcccagatgtgtgcgtgtcgcgcttccagtgctgcgac
atcgacacgacagcaggactcgggaagatctggtggaggctgaggaagacctgctttcag
atcgtggaacacagctggttcgagtccttcatcatcttcatgatcctcctcagctctgga
gctctggcctttgaggacatctacatcgagcagcggaggatggttaaggtggtgctggag
ttcgctgataagattttcacctacatcttcatcctggagatgattctgaagtggctggcc
tacggcttcaagaagtacttcaccaactactggtgctggctggacttcttcattgtcgat
gtttctttggtcagcctggcggccaacatgttgggctattcagactttgcagccatcaag
tccctgcggacgctgcgggcccttcggcctctcagagccctctccagatttgaaggcatg
agggtggtggtgaacgctctgatcggagccattccctccatcatgaacgtgcttctggtc
tgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgtttgccgggaagttt
ggccgctgcgtcagccgctccggctacatccacgacttccgagagatcaacaacaagtcc
gagtgcgaggccaaaaacgacacgtctcagtactactggaccaaagtgaaggtgaacttt
gacaacgtcggcgccgggtacctggcattgctccaagtggcgacgttcaaaggttggatg
gatatcatgtatgcggctgtggactccagagctgtggaggagcagcctgtcaaggagatc
aatctgtacatgtacctgtactttgtcatcttcattatctttggctccttcttcaccctc
aacctcttcattggtgtcatcatcgacaatttcaaccagcagaaacgaaagttaggaggg
caggatatcttcatgacagaagaacaaaagaaatactacaatgccatgaagaagctgggc
tccaagaaacctcagaaacccatccctagacctctgaacacgctgcagggattcttcttc
gacttggttggtaaacaggcgttcgacatcatcatcatggtgctgatcctcttcaacatg
atcaccatgatggtggaaacggacgagcagtctcctcagatggagaagatcctgtatcac
gtcaacctggccttcattgtcgtcttcaccattgagtgcctcattaaaattgtggcgctg
agatgctacttcttcacaatcggatggaacatctttgactttgttgtcgtcatcctttcc
atcgttggaattgtcctcgccgatatcatcgagaagtactttgtgtccccgaccctgttc
cgagtgatccgactggcacgtatcggtcgcattctgcgcctcatcagaggagcgaagggc
atccggacgttactcttcgccctcatgatgtctcttcctgccctcttcaacattggactg
ctcctcttcctcgtcatgttcatttacgccatatttggcatggctaactttgcttatgtg
aaacgacaagcggggattgatgacatgtttaactttgagacgtttgggaacagcatgatt
tgcttgttccagatcaccacttctgcaggatgggacagcctgctcagccccattcttaac
aactcgccggaggagtgtgacgctaacatcccccacacgggcaccacagtcaggggaaac
tgtggaaacccatccgttggcatcaccttctttgtcacctacatcatcatctccttcctc
attgtggtgaacatgtacatcgccatcatcctggagaacttcagtgtagccacagaggag
agcaccgagccgttgagcgaggacgactttgagatgttttatgaagtttgggagaagttt
gaccctgaggccacacagttcattgaatatgccaaattgtcagactttgctgatgcgttg
tcagagccgttgcggattgctaagcctaataggatcaaactcatctccatggacctgcca
atggtcagtggggacaaaatccactgcctggacatcctctttgccttcaccaagcgtgtg
ctgggcgagtctggagagatggacgccctgaagcagcagatggaggagaagtttatgatg
gccaatccgtccaaaatttcctacgagccgataacaacaactttacggcgcaaacaggaa
gaggtttctgccaccattattcagaggtgctaccgcagacacctgatgatacggcaggtg
aaggcggcttcctacttgtaccgtcagatcactacgcctcagcacgcgactgaggacggt
gaagcgctaagcgaggtgatatttggagatgatgcccctgagaaagaaggactgattgcg
accatgatgaaagaaaactatgtctcaagtttgttaaggatagagcggtctacgacgatt
tcctccccctcatccccgccctcttacaacagtgtgacacgagctgcatcggaaatctat
catccgctcgcggtcaagacagaaacagtagtcgaaacctcagcagaagaactgagcaat
cagtcagcggttcagcccaagacacagacggacacagaaccttag
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