Oryzias latipes (Japanese medaka): 101168073
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Entry
101168073 CDS
T02443
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101168073
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101168073
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101168073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
zf-RING_2
Pox_A_type_inc
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
101168073
NCBI-ProteinID:
XP_023821328
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All DBs
Position
17:complement(18805019..18838737)
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AA seq
379 aa
AA seq
DB search
MEELENKRETFLRVRANRQTRLNARIGKMKRRKPEEGGQVCPLCSAPLAGSEEEMSRHVE
QCLIQREGALADEDSADMDGENGRGFEEYEWAGQKRIRATALLEGGFRGTGFATCSIKEN
AADSDADLDVDGDDTLEYGKAQYTEADVIPCSGAGEDQGEAREREALRGAVLNGGMPSNR
ITPEFSKWANDEMPSTSNGESSKTDPSTPSSSSSSSSAPRTCKNSEIEKVTEEESTATTM
EALKARIRELEKQILRGDRYKCLICMRKPTIQSGAEIRSIGAWPGSRALANEVGERQAKS
LPLGLYCLYRGLVIGGYGSSIKRLLPQPLRRDSYTMPLTSIQCWHVHCEECWLRTLGNKK
LCPQCNTITSPGDLRRVYL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctagaaaacaagagagaaacatttttacgagttcgggcaaacaggcaaacg
agattgaatgcccgtatagggaagatgaagaggaggaagcctgaggagggggggcaggta
tgtccgctgtgcagtgccccattggctgggagcgaagaggagatgagtagacatgtggaa
caatgcctgatccagcgcgaaggtgctttggccgacgaagactccgcagacatggatgga
gagaatgggcggggctttgaggagtacgagtgggcggggcagaagaggatcagagctacg
gctttactggagggaggcttcagaggaacgggttttgccacatgtagtatcaaggagaac
gcagcagacagtgacgctgaccttgatgtggacggagacgacaccttggaatacggcaaa
gcccagtacactgaggcagatgttatcccatgctctggcgctggagaggatcaaggagaa
gccagggaaagggaggcgctacgaggagctgtactcaatggtgggatgccttctaacaga
ataacgcctgaattctccaaatgggccaacgatgaaatgccttctacaagcaatggggaa
agcagcaagacagatcccagcaccccttcgtcttcgtcctcctcttcttctgcacctcgc
acttgcaaaaacagcgagattgagaaggttacagaggaggagtccacggctactacgatg
gaggctttgaaggccagaatcagagagctggagaagcagatactacgaggagacagatac
aagtgtctcatctgtatgagaaagcctactatccagtcaggcgcagagatcaggagcata
ggggcgtggccggggtcccgggcactggccaatgaggtcggagagaggcaagctaagtcc
ctccccctcggtctgtactgtctgtacaggggccttgtgattggtggctacggcagcagc
ataaagaggctcctcccacagcccctacggagggactcgtacacgatgcccctcacctcc
atccaatgctggcatgttcattgcgaagagtgctggctccggactctgggaaacaaaaag
ctgtgcccgcagtgcaacaccatcacctcgcccggagacctgaggcgcgtctatttgtaa
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