Oryzias latipes (Japanese medaka): 101168371
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Entry
101168371 CDS
T02443
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03440
Homologous recombination
ola03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101168371 (top3a)
03460 Fanconi anemia pathway
101168371 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ola03032
]
101168371 (top3a)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101168371 (top3a)
Enzymes [BR:
ola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
101168371 (top3a)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Topoisomerases
101168371 (top3a)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101168371 (top3a)
FA (Fanconi anemia) pathway
101168371 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-GRF
Toprim
zf-C4_Topoisom
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
101168371
NCBI-ProteinID:
XP_023813514
LinkDB
All DBs
Position
8:19314472..19334101
Genome browser
AA seq
1024 aa
AA seq
DB search
MLMVHLLGRSSLLRSGLFRLRIQRRFFCAAQRSRCPDTTQETNMIRSRTQIKRVLCVAEK
NDAAKGISEIMSSGRARRREGMSKFNKIYEYEYFLFGQNVTVTMTSVSGHLLALEFKAPF
QKWHSCNPVMLFDAEVEKYCPDNMIPIKRTLEKEVRQCQALVIWTDCDREGENIGFEVID
VCKAVKPNLQVFRAKFSEITPASIRRACETLIEPDANISDAVDVRQELDLRIGASFTRFQ
TLRLQKIFPESLANQLVSYGSCQFPTLGFVVERFKAIKAFIPETFYKIKVLHTLEDDTVE
FSWKRNRLFNHTCCLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLRI
NAKETMKIAEKLYTQGFISYPRTETNIFPANLVLAPLVEQQTHSSTWGTFAQRVLDQPGG
PNPRQGKKSDQAHPPIHPTKYTSSLQGNEARVYEFIVRHFLACVSQDALGQETVVDIDIA
QEKFSTSGLMIIARNYLDVYPYDKWNAKVIPVYEEDSQFQPSAIEMVDGQTSPPQLLTEA
DLISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSK
PNLRSELEADLKLVSEGRKDKRGVLQHHIQKYKTVFIESVRKAKKLDEALSAYLGAALEI
PEAQQQDLEMPLPVRKCPNCGRDMVLKRKREGSSKFLTCVGYPACKTAVWFPDMVLDVSR
DESICPTCQPSPVHMLKFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRGAGAGG
AGGGGRGDDPHSPPPRPPRAAPPRTQRAIPPVPSVPAWNPEPRPPPGGSSVAINNSNDVI
VCNCGQEAVLLTVRKDGPNQGRQFYKCNSGSCNFFLWADQPSQQEAPQSRGPTPSAQRIQ
QLPRPSAGFRNASGGRRGHEAGGSGHSGQTLCNCNQTAVTRTVQKDGPNKGRMFHTCGKP
REQQCGFFQWADENVPPPDGGFNRLEDGRRKVMGDSNKPPTAKKPRHCGNCHMPGHTRVT
CPQR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggtgcacctcctgggtcgatcctcactacttcgatcgggactctttcggtta
aggatccagcggaggtttttctgtgccgcacagcgcagccggtgtccagacacgacacaa
gaaacaaacatgatccggagcaggactcagatcaagcgggtcctctgtgtggccgagaag
aacgatgcagccaaaggcatctccgaaatcatgtcgagcggcagagcgcggaggagggaa
ggaatgtccaagtttaataaaatctatgaatatgaatactttctctttggtcagaatgtg
acagtgaccatgacatccgtatcgggtcacttactggctctggagtttaaagctcctttt
cagaaatggcacagttgtaatccggtgatgttgtttgatgcagaagtagagaagtattgt
ccagataacatgattcctattaagcggacattagagaaagaggtgaggcaatgccaggcc
ttggtcatctggactgattgtgacagagagggagaaaacattggcttcgaagtgattgat
gtttgcaaagcagtgaagcctaacttgcaagtcttccgagcaaagttttctgagatcaca
ccggcttccattcggagagcgtgtgagactctaatagagccagatgcaaacatcagtgat
gccgtggatgtgagacaggagctggatttacggataggtgcatccttcacccgattccag
acgctccgcctgcagaagattttcccagaatccttggccaaccagctcgtctcatatggc
agctgtcaatttcccactctgggctttgtggtggaacgcttcaaagccatcaaagctttt
ataccagagaccttctacaaaatcaaagtgctacacacactagaggacgacaccgtggag
ttcagttggaaacgaaaccggctctttaaccacacgtgctgcctggtgctctaccagatc
tgcatggaggatcccatagcaacagtcacctcagtaacaagcaaaccaaagagtaaatgg
agaccgctgcctctggacactgtggagctggagaaactggcttctcggaaactcagaata
aacgccaaagagaccatgaagattgccgaaaagctctacacccaagggtttatcagctat
cctcgcacagaaaccaacatttttcctgcaaacttggtcctggcgcccctggtggagcag
caaactcacagctcaacgtgggggacatttgcccagcgggtgcttgaccagcctgggggg
cccaacccaaggcagggcaaaaaatcggaccaggcccaccctcccatacaccccactaag
tacactagctctctgcagggaaatgaagctcgtgtctacgagtttattgttcgacacttc
ctggcctgtgtgtcccaggatgctttggggcaggagactgtggtggacatagacattgct
caagagaagttctctacctccggactcatgattatagccaggaactacctggatgtttat
ccgtacgacaaatggaacgcaaaggtgattccggtgtatgaagaagactctcagttccag
ccctctgctattgagatggtagacggacagacgagtccaccgcagcttctcactgaagcc
gacctcatttcactgatggagaagcatggcatcggaactgatgccacccacgcagagcac
atcgagaccatcaaaagccgcatgtatgtgggtttgacagcagaccagaggtttctccct
ggagaactcggcatgggattagttgaaggttacaactccatgggctatgagatgtccaaa
ccaaacctgcgttctgagctggaggccgacctcaagctggtatcagagggtcggaaggac
aaaagaggcgtgctgcagcaccacatccagaagtacaagaccgtcttcatcgaatctgtc
aggaaggcaaagaagttggatgaagctctgtcagcatatctgggtgcagctctggagatc
cctgaagcgcagcagcaggacctggagatgccgctgccggtgaggaagtgtccaaactgt
ggtcgggacatggtgctgaagcggaagagggagggaagcagtaagttcctgacctgtgtg
ggttacccagcctgtaaaacagcagtgtggttccctgacatggttctggacgtcagcaga
gatgaaagcatttgtcccacatgtcagccaagccctgtccacatgttgaagttcaagttc
cgcagaggttcccttcctcccatgatgcctctggagtttgtaggctgcattggtggttgc
gacgagacactcagggaggtgctggacctgaaataccttagaggagctggggcgggagga
gctggcggtggtggaagaggcgatgatcctcattctcctcctccaaggccccccagggca
gcaccacccagaacccaaagggctattcctcctgttccttctgtaccagcctggaacccc
gagccaagacctccaccagggggcagcagtgtggccataaacaacagcaatgatgtgatt
gtgtgcaactgtggtcaggaggcagtacttctgactgtgcgtaaagatgggcccaaccaa
ggccggcaattttacaagtgcaattcagggagttgcaacttttttctgtgggctgatcag
ccaagccagcaggaggcgccgcagagtcgagggccgacaccttcagcacagagaatccaa
cagcttccgaggccttctgcggggttcaggaacgcatctggaggccgcagagggcatgaa
gcaggtggatcggggcattcgggacagactctgtgcaactgtaaccagactgctgtgact
cgaaccgtgcagaaggacggccccaacaagggacgcatgttccacacctgcgggaaacct
agagagcaacagtgtggattcttccagtgggctgacgagaacgttcctccaccagatggt
ggattcaataggttagaagatggaagaaggaaagtgatgggggactcgaacaaacccccc
accgccaagaaacctcgccactgtggcaactgccacatgccgggacacacccgggtcacc
tgtccacagcggtga
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integrated database retrieval system
