Oryzias latipes (Japanese medaka): 101170630
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Entry
101170630 CDS
T02443
Symbol
tfdp1
Name
(RefSeq) transcription factor Dp-1
KO
K04683
transcription factor Dp-1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03083
Polycomb repressive complex
ola04110
Cell cycle
ola04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101170630 (tfdp1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101170630 (tfdp1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101170630 (tfdp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101170630 (tfdp1)
03036 Chromosome and associated proteins [BR:
ola03036
]
101170630 (tfdp1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
101170630 (tfdp1)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
101170630 (tfdp1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
Motif
Other DBs
NCBI-GeneID:
101170630
NCBI-ProteinID:
XP_004081539
UniProt:
A0A3P9HY99
H2MB96
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All DBs
Position
21:complement(10674049..10689510)
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AA seq
413 aa
AA seq
DB search
MAKDAGLIETNGELKVFIDQNLSPSKGILSLVAVQPAAAPVAKQLLPKTLGPSNVNVAAH
VQHVPHMVIGTPQRPSVSNTILVNSPHTPSSQFLTQTQTADASPWSSGKRGKKGEKNGKG
LRHFSMKVCEKVQKKGVTTYNEVADELVAEFSSADNHMSPNDSHVYDQKNIRRRVYDALN
VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFK
NLVQRNRQSEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIH
DDIEVLKRMGMACGLEVGKCSPEDLKVARSLVPKALEPYVIEMAKGPISNVYITGGSSAN
GARYPASSDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDDDEEYDENDDED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgctggtctgattgaaacgaatggagaactgaaggttttcattgatcag
aatttgagccccagtaaaggcatcctatccttggttgctgtccagccagcagctgcgcct
gtggccaaacagctactacccaaaacacttgggccttcaaatgtgaatgttgcagcacat
gtgcaacacgtgccacacatggtgattggaacgccccagagaccatcagtatcaaacacg
atcttggtgaacagtccacacacacccagctcccagttcctcactcagactcaaacagca
gatgcctctccttggtcatcaggaaagcgtggtaagaaaggagagaaaaacggaaaaggc
ttgaggcatttctccatgaaagtgtgtgagaaagtgcagaagaaaggagtaactacctac
aatgaagtggcagatgaactagttgctgagttcagctccgcagacaaccacatgtcaccc
aatgactcgcatgtatacgaccaaaagaatattcggcggcgtgtttatgatgcactgaac
gtgctcatggccatgaacatcatctcaaaagagaaaaaggaaatcaagtggattggtttg
cccaccaactcagcgcaagagtgtcaaaatttagaggtggagagacaaaggcggttggag
aggattaagcagaaacagtcacagcttcaggagcttattctgcagcaaatagcttttaag
aaccttgttcagaggaacagacagtcggagcagcaagcaaacagacccccaccccctaat
tcaatcatccaccttccttttatcatcgtcaacaccagcaagaagacggtcattgactgc
agcatctccaatgacaagttcgagtatttgttcaatttcgacagcatgtttgagatccat
gatgatatcgaggtgctgaagcgtatgggcatggcctgcggcttggaagtgggaaaatgt
tctccagaggacctgaaggttgctcgtagcctggtgcccaaagcgcttgagccttatgtt
atagagatggccaaaggccccatcagtaacgtgtacatcactggggggtcctctgccaac
ggagcgcgttaccctgccagcagtgacggctgcaccgacggcaccatggcctccagctcc
aacgactctcactacagcggctcccgtgtggagaccccggtgtcttacatgggcgacgac
gacgacgacgaggagtatgacgagaacgatgacgaagactaa
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