Oryzias latipes (Japanese medaka): 101175046
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Entry
101175046 CDS
T02443
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101175046
03036 Chromosome and associated proteins [BR:
ola03036
]
101175046
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
101175046
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
101175046
COMPASS/SET1 complex (yeast)
101175046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
ASH2L-like_WH
PHD_3
Motif
Other DBs
NCBI-GeneID:
101175046
NCBI-ProteinID:
XP_023812885
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All DBs
Position
7:complement(34351198..34399022)
Genome browser
AA seq
648 aa
AA seq
DB search
MVVGVSKEGGDPGRCGSAAAGVARHPSGNCRRRDEHGDEATTKRFKRILAEETAGAQDDP
EGVEGERAVSMESPNTPVYCVCRRPDINCFMIGCDSCSEWFHGDCIGVSERAAKSIRVWF
CLSCREKDSSLELKYRQKKCKEWDDGELEPNKSSKSQRDGSFVPQQKMDKRRSSQIKRSA
RMCGECDACLRTEDCTMCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVKDEESFCS
ISRGRGLPGKGTGQHMEEDEEEDAFSESELELYEQYKAAGYRDLVWHSEEEEEEGVQLDS
LRKKAVKVKHVKRRDKKPEKKKSVSVPKEESKPRRHKVKQRHKERVRHSERADESGAKEV
GGVLRQCLGPGCTELARSMSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCVAEEMGRR
QLERIRREQQAARLRLTQMEKRFHDLEGIIATAKLQQVQEHEEVTEGDGDDTDLQIFCVS
CSHPVNPKVALRHMERCYTKFESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVL
CPEHSRDPKIQLDEVCGFPLVKDVFEPTGEFCRVSKRKCNKHYCWEKLRRAEVDLERVRV
WYKLDELFEQERNLRTAMTNRAGLLALMLHQTIQHDPITTNLRSGKDR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgggggtgtccaaggaggggggtgatcctggcagatgcggttctgcagcagca
ggggtcgctcgccacccctcaggaaactgcagaagaagagacgagcatggggatgaagcc
acaacaaagaggttcaaacggattctggctgaggagacagcaggagcccaggatgatcct
gagggtgtggaaggagaaagagcagtctccatggaaagccctaatactccagtctactgt
gtctgcaggagaccagacatcaactgtttcatgatagggtgcgacagttgctcggagtgg
tttcatggtgactgcattggcgtatcagagagggcagcaaaatctatcagagtctggttc
tgcctgtcctgcagagagaaagactcgtctctggagctcaaataccggcagaagaagtgt
aaagagtgggatgatggagagttggagccaaacaaaagtagcaagtctcagagagacggg
agcttcgtcccccagcagaagatggacaaaaggcgaagctcacagatcaagcgttcagcc
cgcatgtgcggcgagtgcgacgcctgcctaagaaccgaagactgcactatgtgtgacttc
tgcaaggacatgaagaagtttggtgggcccaacaaaattcgtcagaagtgcagactccgg
cagtgtgaggtccgagctcggaagatgcttcgagttaaagatgaggagagcttctgcagc
atcagcagggggcgtggtctccccgggaaagggacagggcaacatatggaggaagatgaa
gaagaggacgctttcagtgagagtgagctggagctgtatgaacagtacaaggcggctggc
tacagagacctggtgtggcacagtgaagaagaggaggaggagggtgttcaattagattct
ctaaggaagaaagcggtaaaggtcaaacatgtgaagagacgggacaagaagccagaaaag
aagaaatctgtttctgtcccaaaggaggagtcaaagccccgacgtcacaaagtgaagcag
cggcacaaggagcgtgtgcgccacagtgagcgagcagatgagagtggagctaaagaggtc
gggggggttctacgacagtgtctgggtccaggctgcacggagctggccaggagcatgtcc
aagtactgttcagaagactgtggtatgaagcttgccgcaaatcggatctacgagatcctt
ccccagaggattcagcagtggcagcagagcccttgtgttgctgaagagatgggccgccgg
cagctagaacgtatccggagggagcagcaggcagctaggctccgcctcacacagatggaa
aaacgcttccacgatcttgaaggcatcatagctacggccaagctgcagcaggtccaggaa
cacgaggaggtaactgaaggagatggtgacgacacagacctccagatattctgtgtgtcc
tgcagtcatcctgttaacccaaaggtggcactgcgacacatggagagatgctacactaag
ttcgagagccagacttcctttggttccatgtatcctacccgcattgagggtgccaccagg
ttgttttgtgatgtctacaaccctcaaagtaaaacgtattgtaaacggctgcaggtcctt
tgtccagaacattccagagatccaaagatccaattagatgaagtatgtggctttcctttg
gtcaaagacgtgtttgagcccactggagagttctgccgggtttctaaaaggaagtgcaac
aagcattactgctgggagaaactgcggcgggctgaagtggaccttgagagagtcagagtg
tggtataagctggatgagctctttgagcaggagagaaatctgaggacagccatgaccaat
cgagcaggtttgttggctttgatgcttcaccagaccatccagcacgacccgattactacc
aacctgcgctcgggcaaagaccggtag
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