KEGG   Orcinus orca (killer whale): 101280840
Entry
101280840         CDS       T05247                                 
Symbol
VCL
Name
(RefSeq) vinculin isoform X2
  KO
K05700  vinculin
Organism
oor  Orcinus orca (killer whale)
Pathway
oor04510  Focal adhesion
oor04520  Adherens junction
oor04670  Leukocyte transendothelial migration
oor04810  Regulation of actin cytoskeleton
oor05100  Bacterial invasion of epithelial cells
oor05146  Amoebiasis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101280840 (VCL)
   04520 Adherens junction
    101280840 (VCL)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101280840 (VCL)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    101280840 (VCL)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    101280840 (VCL)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    101280840 (VCL)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oor04812]
    101280840 (VCL)
   04147 Exosome [BR:oor04147]
    101280840 (VCL)
Cytoskeleton proteins [BR:oor04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     101280840 (VCL)
Exosome [BR:oor04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101280840 (VCL)
SSDB
Motif
Pfam: Vinculin VMAP-M0
Other DBs
NCBI-GeneID: 101280840
NCBI-ProteinID: XP_004273139
LinkDB
Position
14:31852540..31958334
AA seq 1134 aa
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIVKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNKA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVVDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKPGNPAAKVGISAVAEADAADAVGSPLPPEMEDDYEPELLLMPSSQ
PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK
DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS
DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq 3405 nt   +upstreamnt  +downstreamnt
atgccggtgtttcatacgcgcacgattgagagcattctggagccggtcgcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggatggcaaagccatccctgacctc
accgcgcctgtggccgccgtgcaggcggccgtcagtaacctcgttcgggttggaaaagag
actgttcaaaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gtggagaatgcttgcaccaagcttgtccaggcagcccagatgcttcagtcagacccttac
tcagtgcctgctcgagattatctaattgatggatcaaggggcatcctctccggcacatca
gacctgctcctcaccttcgacgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggaaactatggaagatttggtcacttac
acaaagaatcttggaccaggaatgactaagatggccaagatgattgatgagaggcagcag
gaactgactcaccaggagcaccgagtgatgttggtgaactcaatgaacaccgtgaaagag
ttgctgccagttctcatttcagctatgaagatttttgtaacaactaaaaactcaaaaaac
caaggaattgaagaagctttgaaaaatcgtaattttactgtagaaaagatgagcgctgaa
attaatgagatcattcgtgtattacaactcacttcttgggacgaagatgcctgggccagc
aaggacactgaagccatgaagagagcgttggcctccatagactccaaactgaaccaggct
aaaggttggctccgtgaccccagtgcctccccaggtgatgctggtgaacaggccatcagg
cagatcttagatgaagctggaaaagttggtgaactctgtgcaggcaaagaacgcagggag
atcctgggaacctgcaaaatgctagggcagatgactgatcaagtggctgacctccgagcc
agaggacaaggagcctcaccggtggccatgcagaaagcccagcaggtgtctcagggtctg
gatgtgctcacagcaaaagtggaaaatgcagcccgcaagctggaagccatgaccaactca
aagcagagcattgtgaagaagattgatgctgctcagaattggcttgcagatccaaatggt
ggaccagaaggagaagaacagattcgaggggctttggctgaagctcggaaaatagcagaa
ttgtgtgatgatcctaaagagagagatgacattctacgttctcttggagaaatatctgct
ctgacttctaaactagcagatctacgaagacagggaaaaggagattccccagaggcccga
gcattggccaaacaggtggccacggccctacagaacttgcagaccaaaaccaacaaggca
gtggccaacagcagacctgccaaagcagctgtccaccttgagggcaagattgagcaggca
cagcggtggattgataatcccacagtggatgaccggggagttggtcaggctgccatccga
gggcttgtggccgaaggtcatcgtctggcaaatgtcatgatggggccttatcgccaagat
cttcttgcaaagtgtgaccgagtggaccagctgacggcccagctggctgacctggctgcc
agaggggaaggggagagtcctcaggcgagagcccttgcatctcagctccaagactcttta
aaggatctgaaagcccggatgcaggaggccatgactcaggaggtgtcagatgttttcagt
gatactacaactcccatcaagctgttggcagtggcagccactgcccctcctgatgcaccc
aatagggaagaggtatttgatgagagggcagctaactttgaaaaccattcaggaaggctt
ggagccacggcagagaaggcggctgctgttggaactgctaataaatcaacggtggaaggc
attcaggcctcagtgaagacagcccgagaactcacaccccaggtcgtctcagcggctcgc
atcttacttaggaatcccggaaatcaagctgcttatgaacattttgagaccatgaagaac
cagtggatcgataatgttgaaaaaatgacagggctggtggacgaagccattgacaccaaa
tctctgttggatgcttccgaagaagcaattaaaaaagacctggacaagtgtaaagtcgcc
atggccaatattcagcctcagatgctggtcgctggggcaaccagcattgctcgtcgggcc
aaccggatcctgctggttgctaagagggaggtggagaactctgaggatcccaagttccga
gaggccgtgaaagccgcctctgacgaattgagcaaaaccatctccccaatggtggtggat
gcaaaggctgtggcaggaaacatttctgaccctggcctgcaaaagagcttcctggactcg
ggataccggatcctgggagcagtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccgcctcctccgccagaccttgaacagctccgactgacagatgagcttgctcct
cccaaaccacctctgcctgagggtgaggtccctcctcccaggcccccaccaccagaggag
aaggatgaagagttccctgagcagaaagctggggaggtgattaaccagccaatgatgatg
gctgccaggcagctccatgatgaagctcgcaaatggtccagtaagccgggtaacccagcc
gctaaggtgggtataagtgctgtagctgaggcagatgcggctgacgctgttgggtcccct
ctcccccctgaaatggaagacgattacgaacctgagctgctgttaatgccatccagtcag
ccggtcaaccagcccattctggcagcggctcagtcattgcatcgggaagctaccaagtgg
tctagtaagggcaatgacatcattgcagcagccaagcgcatggctctgctgatggctgag
atgtctcggctggtcagagggggcagcggtaccaagcgggcactgattcagtgtgccaag
gacatagccaaggcctcagatgaggtgactcggttggccaaggaggttgccaagcagtgc
acagataagcggattagaaccaacctcttacaggtatgcgagcgaatcccaaccataagc
acccagctcaaaatcctgtccacggtgaaggccaccatgctgggccggaccaacataagc
gacgaggagtctgagcaggccacagagatgctggttcacaatgcccagaacctcatgcag
tctgtgaaggagactgttcgagaagcagaagcagcttcaatcaaaattcgaacagatgct
ggatttacactgcgctgggttagaaagactccctggtaccagtag

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