Oceanisphaera profunda: CBP31_07165
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Entry
CBP31_07165 CDS
T04856
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
opf
Oceanisphaera profunda
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opf03032
]
CBP31_07165
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_07165
Enzymes [BR:
opf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CBP31_07165
DNA replication proteins [BR:
opf03032
]
Prokaryotic type
DNA Topoisomerases
CBP31_07165
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBP31_07165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ART82428
UniProt:
A0A1Y0D4G2
LinkDB
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Position
complement(1650729..1653146)
Genome browser
AA seq
805 aa
AA seq
DB search
MSEHTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDESLAGHCKDI
VVIIHSDGSVSVSDDGRGIPVGIHEEEGRSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEKLLLTIWRDGKVHEQTYRHGVPQAPLAVVGDTAKSGTLIRFWPSHDTFTNT
EFHFEILAKRLRELSFLNSGISIKLTDEQTDKAAHFEYEGGIRAFVEYLNQNKTPIHPKP
FHFVSEEEGGITVEVAMQWNDSYQENVFCFTNNIPQRDGGAHLAGFRGALTRTLNNFMDK
EGYSKKAKTSASGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVRTAVEQAMNERLSE
YLLENPADAKIVVTKIIDAARAREAARKARDMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHYIIIMTDADVDGAHIRTLLLTFFYRQMPEIVERGYIYIAQPPLYKVKK
GKHEQYLKDEDAMLEYQTNMALDGASLHVNESAPAIGGEHLEKLVKNFRKVEILIERLAR
RAPEVVLNELIYQPALTLEALSDEAQVATWVKNINESLIVDNTHGAEYILEYEYFEERSC
YLPKVKVRQHGIDREFPISYDFFASGEYRSIVELGEGIANLMEEGGYVKRGEKTKPVDNF
AEGLEWLMQESKRGLYVQRYKGLGEMNPDQLWETTMDPGSRRMLQVKIEDAIAADQLFST
LMGDHVEPRREFIEANALRVANLDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacacacttacgactcttcgagtattaaggtattaaaaggtctggatgccgtc
cgtaaacgtccgggtatgtatatcggcgataccgatgatggctccggccttcaccacatg
gtgtttgaggtggtggataactcgatagatgagtccttagccgggcactgtaaagacata
gtagtcatcatccacagcgatggctcagtgtctgtatccgatgatggccgtggcattccc
gtgggcattcacgaagaagaaggccgctctgccgccgaagttatcatgaccgtgttacac
gcgggcggtaagttcgacgataactcctataaagtctccggtggtttgcacggtgttggg
gtgtcggtcgtaaacgcactttctgagaaattgctgctgaccatttggcgcgacggcaag
gtgcatgagcagacctatcgccatggggtgccacaagcgccgttagcggtagtgggcgac
acggcaaaatccggtactttaatccggttttggccgagccacgacaccttcaccaacacc
gaattccattttgaaattttagccaagcgtctgcgcgagctgtcattccttaactcgggt
atctcgattaagttgaccgatgagcagaccgataaagccgcgcattttgaatatgaaggc
ggcatccgtgctttcgtggaatatctaaaccagaacaaaacgccgatccatcccaagccc
tttcactttgtcagtgaagaagaaggcggtattacggtggaagtggcgatgcagtggaat
gactcttaccaagagaacgtgttctgcttcaccaacaacattcctcagcgtgatggtggc
gctcacttggccggttttagaggtgcattaacccgtaccttaaataactttatggacaag
gaaggttacagcaagaaagccaagacttcggcgtctggcgatgatgctcgtgaaggctta
acggcggtgatttcggtgaaagtgccggatcctaagttctcctcacaaactaaagataag
ttagtgtcttctgaggtgagaaccgccgttgaacaggccatgaacgagcgcttgagcgaa
tatttgctggaaaaccccgccgacgccaaaatcgtagtgaccaaaatcatcgatgcggct
cgtgcccgtgaagcggcccgtaaagcccgtgatatgactcgccgtaaaggcgcgctggat
ttggccggtttaccgggcaagttggcggattgtcaagaaaaagatcccgcattatctgaa
ctctacatagtggagggtgactcggccggtggttctgccaagcaaggccgtaaccgtaaa
aatcaggctattttgccgttgaagggtaagatcctcaacgtcgaaaaagcccgcttcgat
aagatgctgtcatctcaagaagtggcgaccttaatcaccgctttaggctgtggtattggt
cgtgacgaatacaatccggataagctgcgttatcactacatcatcatcatgaccgatgcg
gacgtggatggtgcgcatattcgcacgctcttgctgaccttcttctatcgtcagatgcca
gaaatcgttgagcgtggctacatctatatcgcgcagccgcctttgtataaggtgaaaaaa
ggcaagcacgagcagtatctgaaagatgaagatgcgatgctggaataccagaccaatatg
gctctggatggcgctagcttgcacgttaacgagtctgcacccgccattggcggtgagcat
cttgagaagctggtgaagaatttccgtaaagtggaaattctcattgagcgcttagctcgt
cgcgcgccagaggtagtgttaaacgagctgatttatcagccggcgttaacgctagaagcg
ctgagtgatgaagctcaggtcgccacttgggtgaaaaatatcaacgagtccttaatcgtc
gataatacccacggtgccgaatatatactcgagtatgaatacttcgaggagcgcagctgc
tacttgccaaaagttaaagtacgccagcacggcatagaccgcgaattcccgatcagctac
gacttctttgcctctggcgaatatcgcagcatcgttgagttaggcgaaggtatcgccaac
ttgatggaagagggcggctacgtgaagcgcggtgaaaaaaccaagccagtcgacaatttt
gctgaaggtctagaatggctgatgcaagaaagtaagcgtggcctctatgtgcagcgttat
aaaggcttgggcgaaatgaaccccgatcagctgtgggaaaccaccatggatccgggctcg
cgccgcatgctgcaggtaaagattgaagatgccatcgccgcggatcagctgttctcgacc
ctgatgggcgatcacgtagaacctcgtcgtgagttcatcgaagccaacgccttgcgcgta
gctaacctagatatataa
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