Oryza sativa japonica (Japanese rice) (RefSeq): 4344380
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Entry
4344380 CDS
T01015
Name
(RefSeq) ubiquitin-activating enzyme E1 3 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4344380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4344380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4344380
Enzymes [BR:
osa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
4344380
Ubiquitin system [BR:
osa04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
4344380
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4344380
Exosomal proteins of other body fluids (saliva and urine)
4344380
Exosomal proteins of colorectal cancer cells
4344380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_4HB
E1_UFD
Motif
Other DBs
NCBI-GeneID:
4344380
NCBI-ProteinID:
XP_015647669
LinkDB
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Position
7:29478763..29483638
Genome browser
AA seq
1058 aa
AA seq
DB search
MRCLRFLRRGLLSMLPTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQL
AVYGRETMRRLFASHVLVSGLNGLGAEIAKNLALAGVKSVTLHDVKNVEMWDLSANFFLS
ENDIGKNRAAACVSKLQELNNAVLVSALTEELTTDHLSKFQAVVFTDIGLDKAYEFDDYC
HSHCPPISFIKAEVCGLFGTVFCDFGPEFTVLDVDGEDPHTGIIASISNDNPALVSCVDD
ERLEFQDGDFVVFSEVHGMAELNDGKPRKVKNARPFSFCIEEDTTKYDMYIKGGIVTQIK
EPKILRFKSLRDAMRDPGDFLLSDFSKFERSPVLHLAFQALDKFKKEYGRYPAPGCEQDA
QSFLKCAADINEALTDHKLDTIDEKLFRHFASGSRAVLNPMAAMFGGIVGQEVVKACSGK
FHPLYQFFYFDSVESLPTYPLDSEDIKPSNSRYDAQISVFGSKLQKKLEEANTFVVGSGA
LGCEFLKNLALMGVSCSPKGKLTITDDDVIEKSNLSRQFLFRDWNIRQAKSTVAAAAASA
INPNLCIDALQNRACPDTENVFHDTFWEGLDVVINALDNVNARMYMDMRCLYFQKALLES
GTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEK
TPGEVNSFLSNPAQYAAAMRKAGDAQARELLERVSECLGKERCSLFEDCIRWARLKFEDY
FSNRVKQLTFTFPEDAATSTGAPFWSAPKRFPRPLQFSVSDPSHIHFIMSASILRAESFG
IAIPDWAKNTSKLADAVSEVAVPQFEPKKGVSIVTDEKATSLSSASVDDVSVIDDLLAKL
EECAKRLPPGFQMKPIQFEKDDDTNFHMDLISGFANMRARNYSIPEVDKLKAKFIAGRII
PAIATSTAMATGLVCLELYKVIAGEHPIEDYRNTFANLALPLFSMAEPVPPKVMKHQDMS
WTVWDRWSIKGNLTVAELLQWFSDKGLTAYSISCGTSLLYNNMFARHKERLNKKVVDVAR
EVAKVDVPEYRKHLDLVAACEDDDGNDIDIPLVSVYFR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttacggtttctgcgcaggggcttgctctccatgcttcccaccaacaagaga
gccgccggcacggacgacgaccgccccaccgaccccaagagacccaaggtcgcccaaaac
gggagcacgaatggagtggtggtgccggagattgacgaggacctgcacagcaggcagctc
gccgtctacgggagggagaccatgcgccgcctcttcgcctcccatgtcctcgtctctggc
ctcaatggcctcggtgcagagattgccaagaaccttgctcttgctggggtcaagtccgtc
accctacatgatgtgaaaaacgttgagatgtgggatttgtctgccaatttctttttatct
gaaaatgatattggcaaaaacagggctgctgcttgtgtatccaagctgcaagagctcaac
aatgctgttcttgtctctgctctaacagaggaactgaccacagaccacctgtctaaattc
caggctgttgttttcaccgatataggtttagacaaggcctacgaatttgatgactactgt
cacagccactgccctcctatttccttcatcaaagctgaagtttgtggtctctttggtact
gtcttttgtgactttggaccagagtttaccgttcttgatgttgatggtgaagacccacat
actggtataattgcatccatcagcaatgacaaccctgcgttggtgtcctgtgtagatgat
gaacggcttgagtttcaggacggtgattttgtggttttctctgaggtccatggtatggct
gagttaaatgatggaaaaccaaggaaggttaaaaatgcaaggccattttcattttgcatt
gaggaagatacaactaaatatgacatgtatataaaaggtggaatcgttacacagatcaag
gagccaaagatactacgattcaagtcactaagagatgctatgagagatcctggagatttc
cttctgagtgacttctctaagtttgaacgttcccccgtgcttcacctagcatttcaagct
ctggataagtttaagaaagaatatggacgctaccctgctcctggttgtgagcaggatgct
caaagtttccttaagtgtgctgctgatattaacgaagccttaactgatcacaagctggat
acaattgatgagaagttattcagacatttcgcaagtggttctcgagctgttttgaaccct
atggctgcaatgtttggtggtattgttggtcaagaagttgtgaaggcatgttcaggaaaa
ttccatcctctctaccagttcttctactttgattctgtcgaatccctgccaacgtatcca
cttgactctgaagacatcaaaccgtcaaacagccgctatgatgctcagatctctgtattt
ggttccaaacttcagaagaaactggaagaggcaaatacttttgttgtggggtctggtgcc
cttggatgtgaatttttgaagaaccttgctttaatgggagtgtcttgcagccctaaggga
aagctaactataacagatgatgatgtcattgagaaaagtaatttaagccgccaatttctg
ttccgtgactggaatatcaggcaggcaaagtctactgtggccgctgcagctgccagtgct
atcaaccccaacctctgtattgatgctctccagaaccgtgcttgtccagatacagagaat
gtgttccatgacacgttctgggagggtttagatgttgtcatcaatgcgcttgataatgtt
aatgccaggatgtatatggacatgagatgcctgtacttccagaaggcattgttggagtca
ggaacattgggtgcaaagtgcaatacgcaaatggtgattcctcaccttactgaaaattat
ggggcttcaagagatcctccagagaagcaggcaccaatgtgcacagtccattcttttccg
cacaatattgatcattgcttgacttgggcacgctctgagtttgagggtttgctagagaag
acaccaggtgaagtaaattcatttctctctaatccggctcaatatgctgctgccatgagg
aaggcaggtgatgcccaagctagagaattgctcgagcgtgtttctgaatgtcttggcaaa
gagcgttgcagtttgtttgaggattgcataagatgggccagactgaaatttgaggactat
ttctcaaaccgtgtgaagcagctcacatttacctttcctgaagatgctgccactagtacg
ggtgctcctttctggtctgcccccaagcgcttccctcgcccactgcaattttcagtctct
gatccctcccacattcactttattatgtctgcttcaatactgagagctgagtcatttgga
attgctataccggactgggcaaagaacacaagtaagctggctgatgcagtaagtgaagtt
gccgttcctcaatttgagccaaagaaaggggtcagtattgtgacagatgagaaagctact
agcctttccagtgcctcagttgatgatgttagtgttattgatgaccttcttgctaagttg
gaagaatgtgccaagaggttacctccaggattccaaatgaaacctatccaatttgagaag
gatgatgacaccaactttcacatggatctgatctctggatttgcaaatatgcgcgcaagg
aactacagcattccagaggttgacaaattgaaggctaagttcattgctggaagaatcatc
ccagctattgcaacttcaacagcgatggcgacaggactggtctgtcttgagctatacaag
gttattgctggcgagcaccccattgaagactaccgcaatacatttgcgaacctggcactg
ccactattctcaatggctgaacctgttccacccaaggtgatgaagcatcaagacatgagc
tggactgtatgggacagatggtccatcaagggcaatctgactgttgctgagctcctgcaa
tggttcagcgacaagggccttaccgcttacagcatttcctgtggcacttcgctgctgtac
aacaacatgttcgcaagacacaaggagagattgaacaagaaggtggtagacgtggccaga
gaagtcgccaaggtggatgttcctgaatacaggaagcatttggatcttgtggcggcctgc
gaggatgatgatggaaacgacatcgatattcctcttgtctcagtttacttccgatag
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integrated database retrieval system
