KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4349214
Entry
4349214           CDS       T01015                                 
Name
(RefSeq) lysine-specific histone demethylase 1 homolog 3
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 SWIRM DAO FAD_oxidored Pyr_redox_2 Thi4 HI0933_like FAD_binding_3 FAD_binding_2 Pyr_redox_3 Pyr_redox Lycopene_cycl NAD_binding_9 MurD-like_N GIDA AlaDh_PNT_C Shikimate_DH NAD_binding_7 Trp_halogenase
Other DBs
NCBI-GeneID: 4349214
NCBI-ProteinID: XP_015614418
UniProt: Q336Y0
LinkDB
Position
10:20680581..20689226
AA seq 1832 aa
MPDIRSAPGRGKSDEDERRPIGSLFKLKRKRRAPGSAEAKGDSNPSVESEAPDGVVPGEM
DDTLAIIKRKLRKPKKGKEGGDAVVVGSGAEGELLVEEEDVQGGVNVGDGVAEDKSNLEG
VKVEVDEVIGGELKDSGGLGLEDSLSTLFKRSGRKSRQVSVKEEEGVEVAGSHGEEILEK
GSGLVSDRVAKGTKRRRRRTKEEMKNAAAKSESAMAHEGSPNRKVGTSLPRKAKAEAKVK
ISNSNRRSKKSDEKPKASDDVLCHRSLGETIEQDAETRTVLDDGSRNSSDGASHRIEVSA
CLSNQPCLKPCSGELAEEVSLSAANAATDGVSNEHTYSETLLKERNDDAGCSHGKPPTLA
IKSIPGKKPIEMPKKPVRQKDQLLSTDVDNKCVVGSGDTKDVNIENQPAFGIPESHVTGK
GLHPHKMATSVKELDVVDVVAPTDFEDMENASKSKRVTRSSRKRKHGDMAYEGDIDWETL
MQEQGLFSNLSAALVDYPLKSKDKIKISEVLDNGDGSGVAAVRAGLKAKAVTPIEKIKFK
DILKRRGGLQEYLECRNMILSRWCKDVKHILDLAECGVSDVCLDDESPRQTLIRDVYLFL
DQNGYINAGIASDKVKTDHESPPEDVEVSKLNESHERKSVSIQDCIVTEAVQDKKAVVKQ
TDCVLTEASNEESSSAAIHCDAQDLLPPLKSEELIFKEKNQGVLTEGRDESALPSNSDIH
SKSDLDGFILKVEGGSLHQAEAADIEHSENKHEASDRVESGGYGKKIIVVGAGPAGLTAA
RHLQRQGFSVTVLEARNRIGGRVYTDRVSLSVPVDLGASIITGVEADIATERRADPSSLI
CSQLGLELTVLNSACPLYDVVTGDKVPDDLDTDLESEYNGLLDEMAQLFAQNGESAVGLS
LEDGLEYALRKNRVTRSEQDDQLRNVSSAGAVDISESASTEKEIAHCGKEDKTDVLSPLE
RRVMNWHFAHLEYGCAAMLKSVSLPYWNQDDVYGGFGGAHCMIKGGYDTVLESLAKGLDV
QLNHVVTEVLYGSEELGASGNSRKFVKISTSNGNEFVGDAVLITVPLGCLKAQTIKFSPS
LPDWKLSSIDRLGFGLLNKIVLEFPEVFWDDNVDYFGATAEQTDLRGQCFMFWNLKKTVG
VPVLIALLVGKAAIDGQSISSDDHVKNAIVVLRKLFKDASVPDPVASVVTNWGLDPFSRG
AYSYVAVGASGRDYDILGRPVSDCLFFAGEATCKEHPDTVGGAILSGLREAVRIIDLVHS
GKDYVAEVEALQTYQMQSDSERNEVKDMSNKLDACELSTALCKTSSDASYPLFSKETLLQ
EMFFSAKTTSGRLHLAKELLKLPPDVLKSFAGSKDGLSTLNSWILDSLGKNATQLLRHCV
RLLLLVSTDLLAVRLSGIGRTVKEKVCVHTSRDIRAIARQLVSVWVEVFRKEKASNGGLK
LLRRMPSTESSKPRSKDLLSGKPIVRAPNQVSFNPKVASKNARSAGNHSPHTAIKKPENK
AAKLEAMTATRSDGSSLRSQKQQHALEPKVDNGLAMSEEEAAAFAAAEAARAAAIAAAQA
YASVEAEINAPRELPKIPSFHTFAMRDHYLDESDTRKKVLSDNLVRLECISEIDSRNDKA
KNPSVDHANCADVDSSKMTGDNCTQRSYSNENACLINIRDHSTDSGAVDSRFTRAWVDTD
TIFIDGVKDPLAIERWQQQAMEADKEFYSRIRIPDEEDSSSQKQTCRSSASQVAESKPAS
DGQSRGVEHLRQGLINFISTVLMPLYRNKKVDREGYKGIMRKAVTKIIETCTEGEKMMTV
HEFLDSKRKNKIQTFVDKLVERHCHMNRPPNS
NT seq 5499 nt   +upstreamnt  +downstreamnt
atgcccgacattaggtcagcccctgggcggggcaagtccgacgaggacgagcggcggccg
attgggtcgttgtttaaactcaagaggaagcgcagggcaccgggttcggcggaagccaag
ggggattcaaaccctagcgtggaatcggaggctcccgatggtgtggtgccaggggagatg
gatgataccttggctattataaagaggaaattgaggaagcctaagaagggcaaagaaggg
ggtgatgctgtggtggttggatctggagccgaaggcgagctcctggtggaggaagaagat
gtgcagggtggtgttaatgttggtgatggtgttgcagaggataagagcaatctggaaggt
gtgaaagtagaggttgatgaagtcattgggggtgagttgaaggattcaggtggtctaggg
ttggaggactccttgtcgacgctgtttaagagatctggtcgaaagtctcgacaggtctct
gtgaaggaggaagaaggtgtggaagttgctggttcacatggtgaggaaattcttgagaag
ggatctggtttggtttcggatagggttgccaagggcactaaacggagaaggcgacgcaca
aaggaagaaatgaaaaatgctgctgcaaaatctgaaagtgcaatggcccatgaaggatcg
cccaatcggaaagttggcacctccttgcctagaaaggcaaaggcagaggcaaaggtgaag
attagtaattccaataggcgctcaaagaagtctgatgagaaaccgaaggcttcagatgat
gtgttatgtcaccgatcattgggagaaacaattgaacaagacgcggagaccaggacagta
ctggatgatggatctagaaactcatctgatggggccagtcatcgcattgaagtttcagct
tgtttaagcaatcagccttgcttgaaaccttgctcaggagagcttgctgaagaagtgtct
cttagtgcagcaaatgcagccactgatggtgtttctaatgaacacacatattccgaaaca
ttattgaaggaaagaaatgatgatgcaggttgttcccatggcaagccaccgacattagcc
ataaaaagcatacctggtaaaaaaccaatagagatgcccaagaaacctgtccgacaaaag
gatcagttattatctactgatgttgacaataaatgcgtggtgggctcaggtgacactaaa
gatgtcaatatcgaaaatcagccagcttttgggatccctgagtcccatgtgactgggaag
ggcttgcatcctcataaaatggcaacatctgtgaaagagctggatgtagttgacgtggta
gcacccacagatttcgaggacatggagaatgcatcaaaatcaaagcgtgtgacacgtagc
tccagaaaacgcaagcatggtgacatggcatatgagggtgatattgactgggaaactcta
atgcaggagcaggggctgttctcaaacctctcagcagccttagtagattatcctctcaaa
tcaaaagacaaaatcaaaatctcggaagttctcgacaatggagatggtagcggtgttgct
gcagtgcgtgctggcctaaaggcaaaggctgttactccaattgaaaagataaaattcaag
gacatattgaagcgcaggggtggccttcaggaatacctggaatgcaggaacatgattcta
agtcgatggtgcaaggatgttaaacatatattggatcttgcagagtgtggtgtatctgat
gtttgtttggatgacgagtcaccacgtcaaacacttatacgtgacgtgtatttattctta
gatcaaaatggttacataaatgccggaatcgcctcagataaggtgaaaacagaccatgaa
agtcctcctgaagatgtagaagtatccaagctaaatgaatcacatgaaaggaaatctgtc
agtattcaagattgcattgtcactgaagcagtccaggataagaaagctgttgttaaacag
actgattgcgttttgacagaagcatcaaatgaagagagtagctctgctgccattcactgt
gatgctcaagacttgctgcctcccttgaagtccgaagagctgatattcaaggaaaagaat
cagggtgtattaactgaaggtagagatgaatcagcacttcccagcaattccgatatccac
tctaagtctgaccttgatggtttcattttaaaagttgaaggtggcagtcttcatcaagca
gaagcagctgatatagaacattctgaaaacaaacatgaagcaagtgatagagttgaatct
ggtgggtatggaaaaaagataatagttgttggggctggtccagctggcttaactgctgca
cgacatttgcagcgccaaggtttttctgtcactgttcttgaggcacgtaataggattggc
ggtcgtgtttatacagatcgtgtgtctctttcagttcctgtggatttgggtgctagcatt
attacaggtgtggaggctgatatagcaacagaaagaagggctgatccatcatctttgata
tgttctcagcttggtcttgaactgactgtgttgaacagtgcttgccctctctatgatgta
gtaactggcgacaaagttcctgatgatttggatacagatttggaatctgaatacaatggt
cttcttgatgagatggcacagctttttgcacaaaatggtgaaagtgcagtgggtttatcc
cttgaggacggattagagtatgcacttaggaagaatcgtgtgactcgatctgaacaggat
gatcagttaagaaatgtatctagtgctggagctgtagacatttctgaaagtgcttccaca
gaaaaggagatagcccactgtggaaaggaggataagacagatgttctcagcccccttgaa
agaagagttatgaactggcactttgcacatttggaatatggttgtgctgcaatgctcaaa
tccgtttctcttccatattggaaccaggatgatgtgtatggagggtttggaggagctcat
tgcatgattaaaggtggctacgacacagttctagagagccttgcaaaaggacttgatgtt
cagttaaatcatgttgtaactgaagtactttatggatctgaggaactaggtgccagtggt
aatagcaggaaatttgtcaaaatttccacttcaaatggaaatgaatttgtgggagatgct
gtgctgatcactgttcctcttggttgcttgaaagcacagacaattaaattttctccttcg
ttgccagactggaaattgtcttctattgacaggcttggatttggtcttctcaataaaatt
gtcttggagtttcctgaggtcttttgggatgataatgtggattattttggtgcaactgct
gaacaaactgatttaagaggacaatgctttatgttttggaatctcaaaaagacagttggg
gtaccagttctgatagcactacttgttgggaaggctgctatagatggacagagtatcagt
tctgatgatcatgttaagaatgctatagtggttctccgtaagctctttaaggatgcttct
gtaccagatccagttgcatctgttgtgacaaactggggacttgatccttttagcagagga
gcttactcttatgttgcagtaggagcatcgggaagggactacgacattctaggaaggcct
gtttcagactgtttattttttgctggtgaagcaacatgtaaagaacacccagatactgtt
ggtggtgcaattttaagtggtcttcgagaagctgttcggatcattgacttggtacacagt
ggtaaggattatgtggctgaggttgaagctctacaaacttaccaaatgcagtcagatagt
gaaagaaatgaagttaaagacatgtcaaataaacttgatgcatgtgaactttcaactgct
ctgtgcaaaacctcatctgatgcatcctatccactatttagcaaggagactttactgcaa
gaaatgttctttagtgcaaaaacaacatcagggcgtctacatttggctaaagagttattg
aagcttcctccagatgttctgaaatcatttgccgggtctaaagacggactatctacgctg
aactcatggatacttgattctcttgggaaaaatgctactcaactgttgcgacattgtgta
cgcttgcttctgcttgtttcaaccgacctgctagctgttcgcttgtctggaattgggaga
actgtaaaggaaaaggtttgtgtccatacaagtcgagatatacgtgctatagctcgtcag
ttggttagtgtgtgggtagaagttttccgtaaagaaaaggctagcaatggtggactcaaa
ttgctgcgtcgcatgccatcaactgaatccagtaagcccaggagtaaggatctactgtca
ggaaagcctattgtacgtgcgccaaatcaagtttcatttaaccctaaagttgcttcaaag
aatgcaagatctgctggaaaccattcaccacacacagcaatcaagaagcctgagaacaag
gctgcaaaactggaggctatgacggctaccaggtctgatggtagttcgcttcgttcccaa
aagcaacaacatgctctagaacctaaagttgataatggcctagctatgtctgaagaagaa
gctgctgcatttgctgctgccgaggctgctcgagctgctgccatagcagctgcacaggcg
tatgcatctgtagaggcagagataaatgcacctcgtgaacttccaaagataccatcattc
catacttttgcaatgcgtgaccattatttggatgagtctgatacaagaaagaaggtgtta
agtgacaaccttgtgagacttgagtgcatatcagaaattgattccaggaatgacaaagct
aagaacccatcagttgaccatgccaattgtgccgatgttgacagctcaaaaatgactggt
gataactgtactcagaggagctactcaaatgagaatgcctgcctaataaatattagggat
cattctacagatagtggagccgtagacagtcggttcacaagggcatgggttgatacagat
acaatcttcattgatggtgtcaaggatcctctagccattgagaggtggcaacaacaggca
atggaagcagataaagaattctacagtcggatacgtatacctgatgaagaagactcaagt
agccaaaagcagacatgtaggagttctgcctcacaggttgcagaaagcaaacctgcatca
gatgggcaatcacgaggtgtagaacatttaaggcagggtcttataaatttcatatccaca
gtactgatgccactatacagaaacaaaaaggttgacagggaggggtacaagggaataatg
cggaaagctgtcaccaagatcattgagacatgcacagaaggagagaagatgatgactgtt
catgagtttcttgattcgaaaaggaaaaataagattcaaactttcgtggataagttggtt
gagaggcattgccatatgaatcggcctcccaattcataa

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