Octadecabacter temperatus: OSB_32240
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Entry
OSB_32240 CDS
T04001
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
otm
Octadecabacter temperatus
Brite
KEGG Orthology (KO) [BR:
otm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otm03400
]
OSB_32240
Enzymes [BR:
otm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OSB_32240
DNA repair and recombination proteins [BR:
otm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OSB_32240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AKS47737
UniProt:
A0A0K0YA24
LinkDB
All DBs
Position
complement(3156048..3158981)
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AA seq
977 aa
AA seq
DB search
MFEPHQGPRVFGVPLGQDFSTSLHDGLRQYFNTMSPTNVARVEIYVNTRRMQRRLIELFQ
KGNALLLPRIRLVTDLANDSIEHALPPAISPLRRRLEMAQLVKGLLESDPTLASQDSAID
LAESLVALMNEMQGEGVPPETIANLDVSDQSGHWERALEFIKLVQPFFEDGQLDGEGRQR
SVVESLIARWVENPPSHPVIVAGSTGSRGATSLFMQAVAKLPQGAVILPGFDYDMPSNVW
DMMEQKTGAEDHPQYRFKAFCEALDLHPIDTKAWGVSAGTNSARTRLVSLSLRPAPVTHQ
WINDGPDLGNLALATEGITMIEAATPRTEADAIAVRLRQAIEDNQTAALISPDRVLTRQV
TAALDRWGITPDDSAGLPLQLTAPGRFLRHIADLFCEQLDAEQLLVLLRHPLSHSDRPDR
GDHAFRSNALELQLRRYGPPFPTSQSLTDWAKEKPDERQGWVNWISSVLIDLQDDTQRPL
DDHVARHFNVAERLAGGPDTDEAGGLWKKAAGREALRVMSELRSHADAGGEMSAREYRRL
VNSILAAAEVRDRDAGHPQVLIWGTLEARVQSAELVILAGLNEGTWPEAPTPDPWLNRPM
RKQAGLLLPERRIGLSAHDYQQAVCAREVVLSRSVRSDEAETVPSRWVNRLTNLLGGLGD
QGGPECLDAMRERGRHWLSLAANIAAPKMQLDPAPRPSPCPPTDARPQQLSVTQIKTLIR
DPYTIYARKILGLNVLDSLSHTPDAPLRGTIVHKILERFVKEKIDPSSPDAQTSLLSLAT
EVLVEQCPWPAVRALWYARIASFAPHFLEEEAKRRAFSTNIDTEMYGELALTNLSFKLTG
TADRIDLSDDGEALIYDYKTGKAPSPAQQKHFDKQLLLEAAMVERGAFKAVGRVRTQAAV
YIGLGSDLRDQPAPLKDEPTEETWSRFEGLIAKWMDPAKGYTSRSANETLAFEGNYDHLA
RYGEWDETTDATPQDLS
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaccccaccaaggcccgcgcgtatttggcgttcctttggggcaagacttttct
acgtcactgcatgatggtcttcgccagtacttcaacaccatgtcaccaactaatgtcgct
cgcgtagaaatctatgtgaatactaggcggatgcagaggcggcttatcgagctttttcag
aaggggaatgccctgctgttgccgcgtattcgccttgtcacagatttagcgaacgacagc
atcgagcacgcacttccacctgccatttcaccgcttcgcagacggcttgaaatggcacag
ttggtgaaaggtttgctggaatctgacccgacgctcgcttcgcaggactcagcgattgat
cttgctgaaagtcttgtcgcgctcatgaatgaaatgcagggcgaaggggttccgccagaa
acgatcgcaaacctcgacgtttcagatcagtcagggcattgggagcgtgcgttggagttc
atcaaactggttcagccattctttgaggatggtcagttagatggtgaaggtcgccagcgt
agtgttgttgaatcactcatcgctcgttgggtcgaaaatccgccgtcccatccggtcatt
gtagctggatcgacgggctcgcgaggggccacttcgttgttcatgcaagccgtcgcaaag
ttgccgcaaggtgcggtaattctacccggttttgattacgacatgccgtcgaacgtctgg
gatatgatggagcaaaaaaccggtgcggaagaccatccgcaataccggttcaaagccttc
tgtgaggcgcttgaccttcacccgatcgatactaaggcttggggtgtttctgctggtact
aattcggcgcgtacgcgattggtctccctctctttgcgcccagcgccagtaacccatcaa
tggatcaacgatgggcctgatcttggtaacctcgccctcgccactgaaggcattacgatg
attgaggctgcgactcctcgcactgaggcggatgcaattgccgtccgattacgtcaagcg
attgaagacaatcaaaccgctgcgcttatttcacccgacagagtgctaacacggcaagta
actgccgcattggatcgatggggcattacacccgatgacagtgctgggcttccgctacag
ctaaccgcgcctggtcgttttttacgtcacatcgccgatttgttttgcgagcaacttgat
gccgaacagcttctggttctgttacgccacccgttgagtcattcagaccgacccgatcgc
ggcgatcatgcttttcgatcgaacgcgttggaactacaacttcgacgctacggtccaccc
tttccaacgtcccaaagtctgacggattgggcgaaagagaaacctgatgagcggcaaggc
tgggttaattggattagctcggttctgattgatctgcaggacgatactcaaaggccgctc
gatgatcacgttgcacgacattttaacgtggccgaacgccttgctggtggcccggatact
gacgaggctggcgggctttggaagaaggcggctggtcgagaagcactgcgtgtgatgtct
gagttgcgatctcacgcagatgctggtggtgaaatgtccgcacgggaatatcgccggctt
gtgaacagcatccttgcagctgccgaagtgcgagaccgcgacgcggggcatcctcaagtg
ctgatttggggaacgttggaagcccgcgttcaatccgctgagttggtcattctggcaggc
ctcaatgaaggaacttggccggaagcgcccacaccggacccatggctaaaccggcccatg
agaaagcaagccgggttgctgttgcccgaacgccggatcgggctgagtgcacatgactac
caacaggcagtttgcgcacgcgaagttgttctcagccgttcggttcggtctgacgaagct
gaaaccgtaccgagcagatgggtcaaccgtctgaccaacctacttggcgggctgggtgat
cagggtgggcccgagtgcctcgacgctatgcgagaacgcggacggcattggctttccttg
gctgcaaacatcgctgcaccaaagatgcagctagaccccgcgccgcgcccatcgccatgc
ccacctacggacgctcgtccacaacagctctcggtgacgcagatcaagacgttgatccgc
gatccttacacaatctatgcgcgcaagatcctcggcttgaatgtgctggattcattatct
cacacgccggacgcgccgctgcgcggcacgatcgttcacaagatcctagagaggtttgtg
aaggaaaagatcgatccatctagcccagacgctcaaacctctttgctttcacttgcaacc
gaagttctcgttgagcaatgcccatggcctgctgttcgcgcgctctggtatgcgcgcatc
gcttcatttgctcctcacttcttggaagaggaagcaaaacgtcgtgcgttttcgaccaac
attgacacggaaatgtatggtgaacttgcgctcaccaacctgtccttcaagcttacaggg
acggctgaccgaattgatctgtctgacgatggcgaagcgcttatctatgactacaagacc
ggcaaagcaccaagtcccgcccagcagaaacacttcgacaaacaactgttacttgaggcc
gcgatggttgagcgcggcgcgttcaaagccgtcgggcgtgtccgcacacaagcggccgtc
tatattggcttaggaagcgatttacgcgatcaacccgccccgctgaaagatgaaccgacc
gaagaaacatggtcgcggtttgaagggttgatcgccaaatggatggaccctgcgaagggc
tacacctcgcgcagcgctaacgaaactttggcgtttgaaggtaactacgaccacctagcg
cgatatggcgagtgggacgaaacaaccgacgcaacgccgcaggacttatcatga
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