KEGG   Ottowia sp. oral taxon 894: ADJ79_11200Help
Entry
ADJ79_11200       CDS       T04031                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
oto  Ottowia sp. oral taxon 894
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:oto00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    ADJ79_11200
   03410 Base excision repair
    ADJ79_11200
   03420 Nucleotide excision repair
    ADJ79_11200
   03430 Mismatch repair
    ADJ79_11200
Enzymes [BR:oto01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ADJ79_11200
    6.5.1.6  DNA ligase (ATP or NAD+)
     ADJ79_11200
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ADJ79_11200
DNA replication proteins [BR:oto03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    ADJ79_11200
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     ADJ79_11200
DNA repair and recombination proteins [BR:oto03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ADJ79_11200
   NER (nucleotide excision repair)
    Other NER factors
     ADJ79_11200
   MMR (mismatch exicision repair)
    Other MMR factors
     ADJ79_11200
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2520315..2521175
Genome map
AA seq 286 aa AA seqDB search
MRRRRFFRLFALLAAPPWAAAQGEAPPVPQLARSYQGGLHLPDWLVSEKYDGVRAWWDGQ
ALYSRTGRRLPAPAWFTEGWPRMALDGELWAGRGAFEQAQSAAARQQPDDAAWRGLRFMA
FDAPRHGGPATPFAERLTALQAAIGRAGRPTLQAVPQRRVATEAELLAWLREVTRGGGEG
LMLHRANAPWQSGRSGQLLKLKPHEDAEARVIAHLPGKGRHAGRLGALLVQTPEGRRFRI
GSGFTDAQREAPPPVGAWVTYRYRGLHEGSGLPRFATFLRVREEGL
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgcgccgccgccgctttttccgcctgttcgctctgctggccgcgccgccttgggcggcc
gcgcagggcgaagcgccgcccgtgccccagctggcccgcagctaccagggcggtctgcat
ctgcctgactggctggtgagcgaaaagtacgacggcgtgcgcgcctggtgggacgggcag
gccctgtattcacgcacgggccgccgcctgcccgcgcccgcctggttcaccgaaggctgg
ccgcgcatggcgctggacggcgagctgtgggcgggccgtggcgctttcgagcaggcgcag
tccgccgccgcgcgccagcagccggatgacgcggcttggcgcggcctgcgcttcatggcg
tttgacgcgccccggcacggcggcccggccaccccgtttgccgagcgcctgacggccttg
caggcagccattggccgcgcgggccgccccaccttgcaagccgtgccgcagcgccgcgtg
gccaccgaagccgaactgctggcctggctgcgcgaagtaacgcgcggcggcggcgaaggg
ctgatgctgcaccgcgccaacgcgccctggcaaagcggccgcagcggccagctgctcaag
ctcaagccgcatgaagacgccgaggcccgcgtcattgcccacctgccgggcaagggccgc
cacgcgggccgcctaggcgcgctgctggttcaaacgcccgaaggccggcgctttcgcatc
ggctcgggctttaccgatgcccagcgcgaagcgccgccgcccgtgggcgcctgggtcact
taccgctaccgtggcctgcacgaaggcagcggcctgccgcgctttgccaccttcttgcgc
gtgcgcgaagaaggcttgtaa

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