Orientia tsutsugamushi Boryong: OTBS_0395
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Entry
OTBS_0395 CDS
T00531
Symbol
recD_traA
Name
(GenBank) Helicase RecD/TraA, ATP-dependent exoDNAse (exonuclease V)
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ots
Orientia tsutsugamushi Boryong
Pathway
ots03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ots00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OTBS_0395 (recD_traA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ots03400
]
OTBS_0395 (recD_traA)
Enzymes [BR:
ots01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OTBS_0395 (recD_traA)
DNA repair and recombination proteins [BR:
ots03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OTBS_0395 (recD_traA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
PIF1
AAA_11
RsgA_GTPase
AAA_22
nSTAND3
NTPase_1
T2SSE
DEAD
UvrD_C
UvrD-helicase
NACHT
HHH_2
ATP-synt_ab
AAA
AAA_16
MeaB
AAA_14
AAA_29
KAP_NTPase
Herpes_Helicase
ABC_tran
NB-ARC
HHH
SKI
cobW
ATPase_2
AAA_28
MobB
ATP_bind_1
DAP3
MMR_HSR1
SLFN-g3_helicase
AAA_12
Helicase_RecD
Zeta_toxin
SRP54
TsaE
TrwB_AAD_bind
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAM79461
UniProt:
A5CCM9
LinkDB
All DBs
Position
complement(373703..375898)
Genome browser
AA seq
731 aa
AA seq
DB search
MSVLSYSTKASPIHNQSLAGLVERVTFHNTDNGFCIIKVKVNHKKDLITVIGNSATISSG
QHIEASGIWVNDKEYGLQFKAYTLKVSVPTSIEGIEKYLASGLIKGIGPIYAKKLVQTFG
LDVLTVIENQDPALKKVPGIGPIRAKKIWESWNSQKIISDIMLFIHNYNIGASKAVKIYK
AYGAEAINIIKSNPYQLVSDIKGIGFKSADNIAKAIGIPENSMMRARAGLNYALVTAMGN
GSCGMPTDKLINLCHELLNIDVSIIIDALSFEINERNVAVENINGEECIFLKGLAYAELK
IAELLVHISKGKLAWNPISSNKITEYISNANIKLSPSQQDALNQALKSKVMIITGGPGVG
KTTLINSIINILKSEGVVILLAAPTGRAAKRLSEATQHPAHTIHRLVYSRPGQDVRTITK
LKCQLLILDEMSMVDVTTMYAAISALPSTAALFLVGDIDQLPSVGPGQVFSDLIKSQKFP
IVTLTEIFRQNNQSSIISNAHRINNGFFPILQSSQNSNNDFYFINSDTPEDAIDKITELV
QVRLPKKFSISPFTDIQILSPITRGIVGTKNLNSVLQKVLLPSNSANDELLIWGNIFKIG
DKVMQVVNNYDKDIYNGDIGIINTIDHENQNIVINFDGNKISYDFDEIDEIVLAYAITIH
KSQGGEYHTVIIPLMMQHYPMLQRKLIYTAITRAKKLVIVVGQKKALNIAIKKNIAELRY
SMLKKKLMDIT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtattgtcttattctacaaaagcctcgcctatccataatcaaagtttagcagga
ttagtagaaagagtaacttttcataatactgacaatggattttgtatcattaaagttaaa
gtcaatcataagaaagacttaataacagtaattggcaacagtgcaactatttcatccgga
cagcatattgaagctagcggcatatgggttaatgataaagaatatggcctgcagtttaaa
gcttatacattaaaagtttcagtaccaacaagtatagagggtatagaaaaatatttagca
tctggattgattaaaggcattggtccgatatatgctaaaaaattagtccaaacatttggc
ttagatgttcttacagttattgaaaatcaagatccagcattaaaaaaggtgccaggaata
ggtccaattcgtgctaaaaaaatttgggaaagttggaatagtcagaaaattataagtgat
ataatgctgtttattcataactataatattggcgctagtaaagctgttaaaatatataag
gcttatggagcagaagcaataaatattatcaaatctaatccctatcaattagtatcagat
attaaaggcatagggtttaaaagtgcagataacattgcaaaagctattggtattccagaa
aattcaatgatgagagcgcgagctgggctaaattatgccttagttacagccatgggtaat
ggcagttgtggtatgccaactgataagctaattaatctatgtcatgagttgttaaatatt
gatgttagcattataattgatgcactatcctttgaaatcaatgaacgaaatgttgctgtt
gaaaacataaatggtgaagaatgtatatttcttaagggattagcttatgctgagcttaaa
atagcagaattattagtccatattagtaaaggtaaactagcatggaatccaatcagcagc
aataaaataacagaatacataagcaatgcaaacatcaaactatcacctagtcagcaagat
gctcttaatcaagctttgaagtctaaagtaatgattattactggaggacctggagttggt
aaaactactttaatcaattccataattaatattctaaaaagtgaaggagttgtaatattg
cttgctgctccaactggcagagcagcaaagaggttaagcgaagctactcaacatcctgct
catactattcatcgtttagtatatagtcgtccaggacaagatgtacgaacaattacaaaa
ctcaaatgtcagttattaatattagatgaaatgtcaatggttgatgttacaacaatgtat
gcagcaataagcgcactgccaagcactgctgctctctttttagttggggatattgatcaa
ctgccatcagtaggaccaggtcaggtttttagtgatttaattaagtctcaaaaattccct
atagtaacattaacagaaatttttaggcaaaataatcaaagtagcattattagcaatgcc
catagaattaataacggattttttccaattttacaatctagccaaaactcaaataatgat
ttttattttattaatagtgatacaccagaggatgctattgataaaataactgaattagtt
caggtacgcctaccaaaaaaattttctatttctccattcacagatatacaaatattatct
ccaataaccagaggaatcgtaggaacaaagaatctcaattcagtattacaaaaagtacta
ttaccaagtaactcagcaaatgatgaattacttatttggggcaatatttttaaaattggt
gataaggttatgcaagtagttaataattatgacaaagatatatataacggtgacatagga
attattaatacaattgatcatgaaaaccaaaatatagtaataaattttgatggtaataaa
ataagctatgactttgatgagattgatgaaatagtacttgcttatgctattactattcat
aagtcacaaggtggagaatatcacactgtaattattccattaatgatgcaacattatcct
atgctacaacgaaagttaatttatactgctattaccagagcaaaaaagttagttattgtc
gttggtcaaaaaaaagcattaaatattgctattaaaaaaaatatagcagaactaaggtat
tctatgctcaagaaaaaattaatggatataacttag
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