Cutibacterium acnes C1: PAC1_05415
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Entry
PAC1_05415 CDS
T02330
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pacc
Cutibacterium acnes C1
Brite
KEGG Orthology (KO) [BR:
pacc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PAC1_05415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacc03021
]
PAC1_05415
Transcription machinery [BR:
pacc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PAC1_05415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AFU40838
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All DBs
Position
1126401..1127921
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AA seq
506 aa
AA seq
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MSTTTSSTANTAADEEAKIATARKSTRSTSAKTGTTGRAKKTTATKASQSSAHKSAGGAK
TPTAKSSGAKTTTKPTSTKTAAKSTKTAASKTTKSSGTKTVGNASSGGAKKSTTKRRTTK
AKKETTVAEAASGEVDVTVERDGDDVVLTIGGKKRSLDDVDERDYDPAEAAKDEQQINKE
TEAFSLSDNDDADEPEQTVMVAGATADPVKDYLKQIGKVALLNAVEEVDLAKRIEAGLFA
GEQLADPDAKIREKDREDYEWIAEDGKVAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQ
EGNLGLIRAVEKFDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKLARV
QRQMLQDLGREPTPEELASELDMTAEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDS
EAIVPADAVNFTLLQEQLHDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRER
IRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccaccacgtccagcactgcaaacaccgctgcagacgaggaggcgaagatagcc
accgcgaggaagagtacacgttccacctctgctaagaccggtacgaccggtcgggcgaag
aagaccactgcgacgaaggcaagccagtcgtcggctcacaagtccgctggtggggccaag
actcccacggctaagtcatctggggccaaaaccacgacgaagcccaccagcactaagacg
gccgcgaagtccaccaagacagcggcgagtaagacgacgaagtcttcgggtacgaagact
gttggaaacgcgtcgtccggtggtgccaaaaagtcgacaactaagaggcggaccactaag
gcgaagaaggaaacgaccgtcgccgaagccgcatccggtgaggtcgatgtgaccgtggag
cgcgacggtgacgacgttgtgctgactattggcggcaagaagcgctccctcgacgatgtt
gacgagcgtgactacgacccggccgaggctgctaaggacgagcagcagatcaacaaggag
accgaggcgttctccttgtctgataacgatgacgctgacgagcccgagcagaccgtcatg
gtcgccggcgctaccgcagatcccgttaaggattaccttaagcagatcggcaaagtagct
ctgctcaatgccgtcgaagaggttgatctcgccaagcgcattgaggccggtctgtttgcc
ggcgagcagctagccgacccggatgccaagatccgggagaaggaccgcgaggattacgag
tggatcgccgaggacggcaaggtggcgaagaaccacctattggaggccaacctccgtctg
gtcgtctccttggctaagcgttacaccggtcgcggcatgctcttccttgacctcattcag
gagggcaacctcggtctcattcgtgccgtcgagaaattcgactacaccaagggctacaaa
ttctctacgtacgcgacgtggtggatcaagcaggccattacccgcgccatggccgaccag
gctcgtactattcgtatccctgtgcatatggtcgaggtcatcaacaagctggctcgcgtc
cagcgtcagatgctccaggacctaggtcgtgagcccaccccggaagagcttgccagcgaa
ctcgatatgaccgcagagaaggtcattgaggtgcagaaatacggtcgcgagccgatctcg
ctgcataccccactgggtgaggatggcgattctgagtttggtgaccttattgaggattct
gaggccatcgtgccagcagacgccgtcaacttcaccctgttgcaggagcagctgcatgat
gtcctcgataccttgtccgagcgagaggccggtgttgtgtcgatgcgattcggcttgacc
gacggacagcccaagaccctggatgagatcggcaaggtctacggtgttactcgggagcgc
atccgccagatcgagtccaagaccatgtcgaaactgcgtcatccgagtcgctctcaggta
ctgcgcgactacctcgactga
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