Cutibacterium acnes HL096PA1: PAGK_1800
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Entry
PAGK_1800 CDS
T02638
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pach
Cutibacterium acnes HL096PA1
Pathway
pach03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pach00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAGK_1800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pach03021
]
PAGK_1800
03400 DNA repair and recombination proteins [BR:
pach03400
]
PAGK_1800
Enzymes [BR:
pach01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAGK_1800
Transcription machinery [BR:
pach03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PAGK_1800
DNA repair and recombination proteins [BR:
pach03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PAGK_1800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGJ80608
LinkDB
All DBs
Position
complement(1989071..1992952)
Genome browser
AA seq
1293 aa
AA seq
DB search
MLDTNYYDRLQIGLATADQIRAWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELVAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITAVDDEARHRDLPSLEAKVQTERSRLEQRRDSELEARRVKLEED
MAQLEADGAKADVRRKVKDGAEKELKHIETRAQRQIDRLDAVWDRFKNLKVQDLEGDEIL
YREMKSRFGKYFEGSMGAEAVKRRLHDFDLKSESEKLREIIKTGRGQKKTRALKRLKVVQ
AFLDSGNSPEAMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLVDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVSGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKMHQCGLPKTMALELFKPFVMKRLADLEHAQNVKSAKRMVERQR
SVVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCSAFNADFDGDQ
MAVHLPLSPEAQAEARVLMLSTNNILKPADGRPVALPSHEMIIGAYYLTMALDGLKGEGR
AFTSLAEAIMAHDLGELEIGAKIKLRLKGIVPPHDETVRADGSVILDTTLGQALFNEVLP
DDYPYVDFLVGKKQIGKIVNDLSERMTQLEVAHVLDNVKDIGYKWGSLSGVTVSIGDVQT
PPTKPEILAGYETRAAKVDREYDRGAVTEEERRQDLIQIWTEATAELTAAMEANFTQTNP
IHMMVDSGARGSMTQMRQIAAMRGLVADPKGDIIPRPIKSNFREGLTVLEYFISTHGGRK
GQADTALRTADSGYLTRRLVDVSQDVIVRENDCGTTRGMPKTIAVDDGNGNLVRVEGLDT
AVYARCLAADAVDANGNVVVEANSDLGDEEISRLIAAGISQIKVRSVLTCTAAQGCCARC
YGRSLSTGHLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEA
RSPKGKSPLAEAAGVIRIDESDNRRKLVLVRDDGEDDVEYVVPRRARLEFDLDGTHRVIR
DGVRVAAGEQLMGGTADPQDVLRISGVRRVQEYLVKEVQKVYNTQGAGIHEKHIEIVIRQ
MLRRITVIESGDTQMMPGELVDRGAYEAANRKAVAEGGRPAEGRPVLMGITKASLATESW
LSAASFQETTKVLTDAAINGKTDTLVGLKENVILGKLIPAGTGLEVYRNMRVEPTAEAKA
AAFTMNYDPFDYDFGSGSGEAVPLDDLDLGDLG
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacaccaactactacgaccggttgcagatcggcctggccacggccgaccagatc
cgtgcgtggagccacggcgaggtcaagaagcccgagaccattaactaccgcaccctcaaa
cccgagcgtgacggcctgttctgcgagaagatcttcggaccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgctccaacgtgcgtcgtgagcgtatgggacatattgagctggttgccccg
gtgacccatatctggtatttcaagggggttccctcccgtctggggtacttgctcgatatc
gctccgaaggacctcgagaaggtcatttacttcgcggcctatatgatcaccgccgtcgac
gatgaggctcgccaccgtgaccttccgtcgctggaggccaaggtgcagaccgagcggtcg
cggctggagcagcgtcgtgattccgagctggaggcccgccgggtcaagcttgaggaagac
atggctcagctcgaggccgacggtgccaaggctgacgtgcggcgcaaggtcaaggacggt
gccgagaaggagctcaagcatattgaaacccgcgctcagcgccagattgatcgtctggac
gcggtgtgggatcgcttcaagaacctcaaggttcaggaccttgagggtgacgagattctc
taccgcgagatgaagtcgcgcttcggcaagtactttgagggctcgatgggtgccgaggcg
gttaagcgtcgtctgcacgatttcgacctcaagagtgagtctgagaagctgcgcgagatt
atcaagactggtcgcggccagaagaagacccgcgcccttaagcgccttaaggtggtgcag
gctttcctcgattccggtaactcgccggaggccatggtgctggactgcgtgccggtcatc
ccgccggacctgcgcccgatggtgcaactcgacggtggccgcttcgccacctcggacctc
aacgacctttaccgtcgcgtcattaaccgaaacaaccgcctcaagaggttggttgatctt
ggcgccccggagatcatcgttaacaacgagaagcgaatgctccaggaggctgtcgactcg
ctgttcgataacggtcgtcgtgggcgtccggtgagcggtccgggtaaccgcccgctgaaa
tcgctgtcggacatgcttaagggcaagcagggccgtttccgtcagaatctgcttggtaag
cgcgtcgactactccggccgttcggtcattgtcgtcggtccgcagctcaagatgcaccag
tgtggtttgccgaagacgatggcgttggagctgttcaagcctttcgtcatgaagcgtctg
gctgaccttgagcacgctcagaatgtgaagtctgctaagcgcatggttgagcgtcaacgt
tcggtggtgtgggacgtcctcgaggaggtcattaaggagcatccggttctgctgaaccgc
gcaccgacgctgcaccgcctgggtattcaggccttcgagcctcagctcattgaaggtaaa
gctatccagctgcacccgctcgtttgctcggccttcaatgccgacttcgatggtgaccag
atggctgtgcacctgccgttgagccctgaggcccaggctgaggcccgcgtcctcatgttg
tcgacgaacaacattctcaagccagctgatggtcgcccggtcgctctgccttcgcacgag
atgatcattggtgcttactacctgacgatggcccttgacggtctcaagggtgaggggcgt
gccttcacctcgcttgcggaggccattatggcccacgatcttggcgagctcgagattggt
gccaagatcaagctgcgccttaagggcattgtgccgccgcacgacgagacggttcgcgcc
gacggctcggtgatcctcgataccactctcggacaggcgctgtttaacgaggtacttccg
gacgactacccgtacgttgatttcttggttggcaagaagcagatcggcaagatcgttaat
gacctcagcgagcgcatgacccagctcgaagtggcgcacgtcctcgacaacgttaaggac
atcgggtataagtggggttctttgtccggcgtgaccgtttccatcggtgatgtccagact
ccgccgaccaagccggagatcctggctgggtatgagactcgcgctgccaaggtcgaccgt
gagtacgaccgtggcgccgtgaccgaggaggagcgtcgtcaggatctgatccagatctgg
accgaggccactgccgagctgaccgccgccatggaggctaacttcacccagaccaacccg
attcacatgatggtggattcgggtgctcgaggcagtatgacgcagatgcgccagattgcc
gctatgcgtggcctggtggctgacccgaagggtgacattattcctcgcccgattaagtcg
aacttccgtgagggcctcacggttttggagtacttcatctccacacacggtggtcgtaag
ggacaggccgataccgctctgcgcaccgcggactcgggttacctgactcgtcgtctggtc
gatgtttcccaggacgttatcgtgagggagaacgattgcggcactacccgcggtatgccc
aagacgattgctgttgacgatggcaacggcaatctggtgcgtgttgaggggctggacact
gcggtgtatgcccgctgcctggctgctgacgccgtcgatgctaacggcaatgttgtggtg
gaggccaactctgaccttggtgatgaggagatttctcggctcatcgcggctggaatctcg
cagatcaaggtgcgctctgtgcttacttgcactgctgcccagggctgctgcgctcgctgc
tacggacgttcgttgtcgaccggtcatctggtcgacgtcggtgaggctgttggcattatc
gccgctcagtcgattggtgagcccggaacccagctgacgatgcgtaccttccacaccggt
ggtgttgctggtgacgacatcacccagggcctcccccgtgtcgtcgagcttttcgaggcc
cgtagcccgaagggtaagtcgccgctggctgaggctgcgggtgtcatccgtatcgacgaa
tccgacaaccgccgcaagctcgtattggtacgtgacgacggtgaggacgacgtcgagtac
gtcgtgccgcgccgtgcccgtctcgagtttgatctcgacggtacccaccgcgttatccgc
gacggtgtgcgagtcgccgctggcgagcagctcatgggtggcaccgccgatccgcaggat
gtgttgcgtatttccggtgtccgtcgggtgcaggagtacctcgtcaaggaggtgcagaag
gtttacaacacccagggtgctggtatccacgagaagcacattgagattgtcattcgccag
atgttgcgccggatcaccgtcattgagtcgggtgacacccagatgatgccaggtgagctc
gtggaccgcggtgcttacgaggctgctaaccgtaaggcggttgctgagggaggtcgtccg
gccgagggccggccggtgctgatgggcatcaccaaggcttcgttggctaccgagtcgtgg
ttgtcggcggcttccttccaggagaccactaaggttctcactgatgccgcgatcaatggc
aagacggacaccttggttggtcttaaggagaacgtcatcctcggtaagctcatcccggcc
ggtactggtttggaggtctaccgcaatatgcgggtggagccgactgcggaggccaaggct
gctgcgtttacgatgaactatgacccgttcgattacgacttcggttcgggatcgggcgag
gctgttccgctggatgacttggacttgggcgatctgggctga
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integrated database retrieval system
