Paenibacillus sp. FSL P4-0081: P40081_34415 Help Entry P40081_34415      CDS       T03332                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism paen  Paenibacillus sp. FSL P4-0081 Pathway paen03030   DNA replication paen03410   Base excision repair paen03420   Nucleotide excision repair paen03430   Mismatch repair Brite KEGG Orthology (KO) [BR:paen00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     P40081_34415    03410 Base excision repair     P40081_34415    03420 Nucleotide excision repair     P40081_34415    03430 Mismatch repair     P40081_34415  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:paen03032]     P40081_34415    03400 DNA repair and recombination proteins [BR:paen03400]     P40081_34415 Enzymes [BR:paen01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      P40081_34415 DNA replication proteins [BR:paen03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      P40081_34415 DNA repair and recombination proteins [BR:paen03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      P40081_34415    NER (nucleotide excision repair)     GGR (global genome repair) factors      P40081_34415    MMR (mismatch excision repair)     DNA ligase      P40081_34415   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       P40081_34415 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT HHH DNA_ligase_ZBD BRCT_2 DUF669 Motif Other DBs NCBI-ProteinID:  AIQ32624 UniProt:  A0A7U4KME1 LinkDB All DBs Position complement(7729925..7731937) Genome browser AA seq 670 aa AA seqDB search MDIMFTMEELVAELNQYNYHYYTMDAPQISDKEYDALYDKLVALEAESGIVLPHSPTQRV GGELLKGFTPHRHLAPLWSLDKAQNIEQLRTWNARVLKLVNDYNTKNPENPLPDPCYAVE LKFDGLTLNLTYRDGVLVQAATRGNGVTGEGILAQVKTIKSVPLNIPFKEGLIEVQGEGI MNLSVLADYNTRAAEPLKNARNGAAGALRNLNPKMTADRRLNAFFYNVGYSEGVQFADHQ EMMDFLRSNRFKVNPYLNYFSNFDDVTEQLAEIEESRSGLDYLIDGAVIKVTDFRIREAL GYTDKFPRWAVAYKFEAEETTTILESVSWNVGRTGKVTPLARVEAVELAGVTVQNCTLNN VGDIERKNLKFALGTRVFIRRSNDVIPEILGKVTEESDGGEIIFPENCPACGFPLEMRGA HLFCNNKLDCKPQIVSRITHFASRDAMDIETFSEKTAAQLHEELSVREPADLYELTFEQL VKLDRFGEKKADNLLQALEESKGRDLASFLYALGIPNTGKATTRMLADHYRSLDAVMSAT AEELAGLPDIGGIVAESIVNYFADPFVVVSINRMLALGVEAKAPEAPRVVSTNTFFSGKT VVLTGSLQKMTREEAAERLEALGAKVSGSVSKKTDLVIAGEKAGSKLAKAQQLGIQVIED EDELIRLLES NT seq 2013 nt NT seq  +upstreamnt  +downstreamnt atggatattatgttcacgatggaagagctcgtagccgagctgaatcaatataactatcat tactatacaatggatgcgccgcagatcagcgacaaggaatatgatgcgctctatgacaag ctggtggcgctggaagcggagagcggaattgtactgccgcattctccaacacagcgggtg ggcggggaactgctgaagggcttcacgccacaccgccatctggcaccactgtggagtctc gacaaggcgcagaatattgaacagctgcgcacctggaacgcccgtgtgctgaagctggtg aatgactacaacaccaagaatccggagaatcctctgcctgacccgtgttatgcggtggag ctgaagtttgacggcttaacgctgaacctgacctaccgtgacggcgtacttgtccaggcg gcaacacggggcaacggcgtaacaggcgaaggtatccttgcccaggtgaagacgatcaaa tccgttcctttgaacatcccgttcaaggaaggcctgatcgaagtgcagggcgaggggatc atgaacctgtctgtactggctgactataatacacgtgcggcggagccgctcaagaatgcg cgcaacggtgcagccggtgcgctgcgcaacctgaatcctaagatgactgcggaccgcaga ctgaatgccttcttttataatgtggggtactcggagggcgtacagtttgccgatcatcag gaaatgatggatttcctgcgcagcaaccggttcaaggtcaacccgtatctcaattacttc agtaatttcgatgacgttaccgagcagctggctgagatcgaagagagccgttccggcctc gattatctgattgacggggcagtcatcaaggtgacagatttccggatccgcgaagcgctg ggctatacggataagtttccccgctgggcggttgcctataaattcgaggcggaagaaacc acgacgattctggagtcggtcagctggaacgtaggccgtacaggcaaagtaactccgctg gcgcgcgtagaggctgtggagcttgccggtgttacggtgcagaattgcacacttaacaac gtgggcgacattgaacggaagaatctgaagtttgcactgggcacacgggttttcatccgc cgctccaatgatgtaatcccggagattctgggcaaggtgaccgaagagagtgacggcggg gagattattttccctgagaattgtccggcctgcggcttcccgctggagatgcgcggtgca catctgttctgtaataacaagctggactgcaagccgcagattgtcagccggattacgcat tttgcctctagagatgccatggacattgagacattcagtgagaagacggctgctcagctg catgaagagcttagtgtacgtgagccggccgatctctatgaattgaccttcgagcagctc gtgaagctggaccgtttcggggagaagaaggcggataatctgctccaagcactggaagag agcaaagggcgggacctcgcctccttcttatatgccctcggtatcccgaataccggaaaa gcaaccacccgaatgctggctgaccactaccgcagtctggacgctgtaatgtccgctacg gcggaggagctggccggtctgccggatatcggcgggattgtggctgagagcatcgtgaat tattttgccgacccgttcgtggttgtaagcattaaccgtatgctggcgctgggtgtagag gctaaggcacccgaagctccgcgtgtagtcagtaccaatactttctttagcggcaaaacc gttgtcctgaccggttccctgcagaaaatgacccgcgaggaagcggctgagcgtctggag gctctcggagctaaggtgtccggcagtgtctccaagaagaccgatctggtcattgccggt gagaaggcaggcagtaagctggccaaagcgcagcaactcggcattcaggtcattgaagat gaagacgaactgattcggcttctggaaagctaa

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