Pseudomonas aeruginosa PAO581: M801_4291
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Entry
M801_4291 CDS
T03171
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
paeo
Pseudomonas aeruginosa PAO581
Pathway
paeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M801_4291 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeo03400
]
M801_4291 (recB)
Enzymes [BR:
paeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M801_4291 (recB)
DNA repair and recombination proteins [BR:
paeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M801_4291 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGV60483
LinkDB
All DBs
Position
complement(4581044..4584781)
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AA seq
1245 aa
AA seq
DB search
MSQQQMPVALDPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVLDHGGENAFGRPLSPPE
ILVVTFTDAATQELRERIRSRLGEAARCFAEPQERHDGLLVALRQQYPTERWPGCARLLR
LAAEWMDEAAVSTIHSWCYRMLREHAFDSGSLFTQNLETDQSELLAEVVRDYWRRNFYGL
TAPAAQAVASCYSGPEALGKALQPLLARQDADFRYADQALSAPESLAALLEQGGDWYRQL
DQLDAQARAAWRAARVELEALLRDLRPYLNGNSYRGKDSDETFDAWLQALADWSEGGEQP
ANLGKFGQTRIKLTAKRVAPEHAALRAIDAWAAHQEERPDLAPHLLLHALGEVGHELEIE
KQRRAEIGFDDLLSRLDRALQGPGGERLAQLIREQFPVALIDEFQDTDPVQYRIFERIYR
IAADPDEPQARETGLFMIGDPKQAIYAFRGADIHTYLRAREATRGRHYTLGKNFRSTAAM
VAAANRCFAFAEEHPRGAFRFAREGLENPVPFHAVDAQGRAERLLIDGAEAPAMTFWNLD
VEAGVLGSAAYRQEMAERSASAIRRWLSLADLGRAGFADEQGGWRALRPADIAILVRGRA
EAEAIRSALAARRLASVYLSDRDSVFDSQEAADLLHWLRACADPGADALLRVALATRSLH
LDWATLERLNQDELFWERMVLRFRDYRRSWQAQGVLPMLRRLLADFELPARLLRHADGER
SLTNLLHLAEWLQRAAVELDGEHALIRHLAEQVQSPGSEEILRLESDADLIKVVTIHKSK
GLEYPLVLLPFICSWRELDGNSGAPASFHEDGAAGRVIELARRKEQAARAYEQANDERLG
EDMRLLYVALTRARHSVWLGIAPLVASNSKSPELHKGALGYLLAGGATIGSDGLGQCLAA
LRGECREIVVEPAPEADAERYVAGRGQGLGQARETRRSSREKWWVASYSGLQLQASAGLD
DDEVLESDESQEPISAEEATFHEEGRSAEQPPVAHASEMRDDLHRFPRGPAPGTFLHGLL
EWAGREGFDVARADAQRRRELVARRCDLRGWKDWAEPLDLWLEQYLAEPLRWPGGETSLA
GLVAYQVEMEFWFATHQVQAEAIDALVRRHTLGGAARPALAPTLLNGMFKGFVDLVFEHQ
GRFYVADYKSNWLGADDGAYSPEAMTAAVLENRYDLQYVLYLLALHRQLKARLPDYDYDR
HMGGAVYLFLRGTRAATQGLHFERPPRELIERLDALFSGQPGAER
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagcagatgcccgtggccctcgatccgctggacttcccgttgcacggcagc
cgcctgatcgaggccagcgccggtaccggcaagacgttcaccatcgccctgctatacgta
cgcctggtcctcgaccatggcggcgagaacgctttcggccggccgctgagcccgccggaa
atcctcgtggtgaccttcaccgatgcggcgacccaggaactccgcgagcgtatccgcagc
cgcctgggcgaagcggcgcgttgtttcgccgagccgcaggagcgccacgacggcctgctg
gtcgcgttgcgccagcagtatcccaccgagcgctggccgggctgcgcgcgcctgctgcgc
ctggccgcggagtggatggacgaggccgcggtatcgaccatccacagttggtgctaccgg
atgctgcgcgagcacgccttcgacagcggcagcctgttcacccagaacctggaaaccgac
cagagcgaattgctcgccgaagtggtgcgggactactggcggcgcaacttctacggcctg
acggctccggcggcgcaagccgtggccagttgctacagtgggccggaggcgctgggcaag
gccttgcagccgctgctggcgcggcaggacgccgacttccgctacgccgaccaggcgctg
agtgcgcccgagtcactggcagccttgctggagcagggcggcgactggtatcgccagctc
gaccaactggacgcgcaggcccgcgccgcctggcgcgcagcgcgcgtcgaactggaagcg
ctgctgcgcgacctgcgtccctacctgaacggcaacagctatcgcggcaaggacagcgac
gagaccttcgacgcctggctgcaagcgttggcggactggagcgagggcggcgagcagccg
gccaacctgggcaagttcggccagacccggatcaagctcaccgccaagcgcgtggcgccc
gagcatgccgcgctaagggccatcgacgcctgggccgcgcatcaggaagagcgtcccgat
ctcgctccccacctgttgttgcacgcgttgggcgaagtcgggcacgaactggagatcgag
aagcagcggcgtgccgagatcggcttcgacgacctgctcagccgcctcgaccgcgccttg
caggggcctggtggcgagcgcctggcgcaattgatccgcgagcagttcccggtggcgctg
atcgacgagttccaggataccgacccggtgcagtaccggatcttcgagcgcatctaccgg
atcgccgccgatcccgacgagccccaggcgcgggaaaccggcctgttcatgatcggcgac
cccaagcaggcgatctacgccttccgcggtgccgacatccatacctacctgcgcgcccgc
gaggccactcgcgggcggcattacacccttggcaagaacttccgctcgaccgccgccatg
gtggcggccgccaaccgctgcttcgccttcgccgaagagcatccgcgcggcgccttccgt
ttcgcccgcgaggggctggaaaacccggtgccgttccatgcggtggacgctcaggggcgc
gccgaacgtttgttgatcgacggtgccgaggcgccagcgatgacgttctggaaccttgat
gtcgaagccggcgtgctcggctccgcggcgtatcgccaggaaatggccgagcgcagcgcc
agcgccatccgccgctggctgagcctggccgacctgggccgcgccggcttcgccgacgag
cagggcggctggcgggcgttgcgcccggcggatattgccatcctcgtccgcggtcgcgcc
gaggccgaggcgatccgcagcgcgttggcggcgcgacgactggccagcgtctacctgtcc
gaccgcgactcggtgttcgacagccaggaagccgccgacctgctgcattggctgcgtgcc
tgcgccgaccccggcgccgatgcgctgctgcgggtcgccctggctacccgcagcctgcac
ctggactgggcgaccctggaacgattgaaccaggacgaactgttctgggaacggatggtc
ctgcgcttccgcgactatcgccggtcctggcaggcccagggcgtattgccgatgctgcgg
cgcctgctcgccgacttcgaactgccggcgcgcctgctgcggcatgccgatggcgagcgc
agcctgaccaacctgctgcacctggccgagtggctgcagcgcgcggcggtggaactggac
ggtgagcacgcgctgatccgccatctggccgagcaggtgcagagtccggggagcgaagag
atcctccgcctggaaagcgacgccgacctgatcaaggtggtgaccatccacaagtccaag
gggctggaataccccttggtgctgctgcccttcatctgcagctggagggagctggacggc
aacagcggcgcgccggcgagtttccacgaggatggcgctgcagggcgggtcatcgagctg
gcgcggcgcaaggagcaggctgcgcgggcctacgagcaggccaacgacgagcgcctcggc
gaagacatgcgcctgctctacgtggccctgacccgcgcccgccattcggtgtggctgggc
atcgcgccgctggtggcgagcaacagcaagtcgccggagttgcacaagggggccctgggc
tacctgcttgccggcggcgcgaccatcggcagcgatggcctcggacaatgcctcgccgcg
ttgcgcggcgagtgccgggagatcgtcgtcgagccggcccccgaggcggacgccgaacgc
tatgtcgcagggcgcggccagggccttgggcaggcccgcgaaacccgccgcagcagccgc
gagaagtggtgggtcgccagctattccggcctgcaattgcaggcctccgccgggctggac
gatgacgaggtgttggagagcgacgaatcgcaggagccgatcagcgccgaggaagccacc
ttccacgaagaaggccgttccgccgaacagccgccggtcgcgcacgccagcgagatgcgc
gacgacctgcatcgcttcccgcgcggaccggctcccggcaccttcctccacgggctgctc
gaatgggccggccgcgaaggcttcgatgtggcgcgcgccgatgcccagcggcgccgcgaa
ctggtcgcgcgacgctgcgatctgcgtggctggaaggactgggccgaaccgctcgacctg
tggctggagcagtatctcgccgaaccgctgcgctggcccggtggcgaaaccagcctggcc
gggctggtcgcctaccaggtggaaatggagttctggttcgccacccaccaggtccaggcc
gaggcgatcgacgccctggtccggcgccataccctcggcggcgcggcgcgtccggcgctg
gcgccgaccctgctgaacggcatgttcaagggcttcgtcgacctggtcttcgagcaccag
gggcgtttctacgtggccgactacaagtccaactggctgggcgccgacgatggcgcctac
agcccggaagcgatgaccgccgcggtgctggagaaccgttatgacctgcagtacgtgttg
tacctgctggccctgcaccggcagttgaaggcgcgcctgcccgactacgactacgaccgc
cacatgggcggcgccgtgtacctgttcctccgcggcacccgcgcggcgacccagggcctg
cacttcgagcgcccgccgcgggaactgatcgaacgcctggacgcgctgttcagcggccag
ccgggagccgagcgatga
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