Pseudomonas aeruginosa PA1: PA1S_20725
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Entry
PA1S_20725 CDS
T02928
Name
(GenBank) beta-agarase
Organism
paep
Pseudomonas aeruginosa PA1
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
AHA20551
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Position
complement(4453688..4455937)
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AA seq
749 aa
AA seq
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MIRSRWHLPLLLGLLAVAAPLAANDTQQVLFNFVKPMAVVGITLEDADLPSVTAEATPEG
DILRRVTFSPAQRPTLRMSPAQGRWDWSAADYVSLRIQNAMSWDMTLEVAIEGEQGAPGL
QASIELPAGPPQTLLVPLRAVSPEALGMRAGPPMPQMVEGQRVLLAPRVEGSLDRARVGA
LSLSLRSPQAPQSILLGRFGIRAGRAVERSILTGLIDRYGQYSRADWSEKIRSDEQLRSA
YAAEAAQLRDWERQTPARDRFGGLLGGPVFEASGFFRTEKRGGRWWLVTPEGHPFWSLGV
NAVTADGSRTYVEGREPMFAELPAEGEPLAAFFGKGDDRRGVAAQAGRRFGHGRWFDFLG
ANRQRIAPQASADQLAGEWRQRTLERLSAWGFNSLGNWSDPALAAQARMPYSLPLSIAGD
YATVSSGFDWWGAMPDPFDPRFAMAAERVIAIAARDHRDDPWLLGYYADNELAWAGRDGS
AQARYGLAFGALTLSMDSPAKRAFVKQLKAKYLGHEALAEAWGIELAAWEALEAPGYAAP
LPGEGHPAIAEDYSAFLRLYADAYFKTLRDALQWHAPNHLLLGGRFAVSTPEAITSCARY
CDLLSFNLYTPLPGQGLDDSLLARLDKPVLISEFHFGSRDRGPFWGGVSEAANERARGDS
YRTFLEAALKSPYIVGAHWFQYLDQPASGRLLDGENGHIGLVGITGLPFAGFVDTVRRSN
LAALSRLSAMARSMPAVEPLPPREDSAGS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttcgcgttggcatcttcccctgcttctcggcctgctcgcggtggccgcgccg
ctggcggcgaacgacacccagcaggtgctgttcaacttcgtcaagccgatggccgtggtc
ggcatcaccctggaggatgccgacctgcccagcgtgacggcggaggccaccccggagggc
gacattctccgtcgcgtcaccttcagcccggcgcaacggcccaccttgcgcatgagtccg
gcgcagggccgttgggactggtccgcggcggactacgtgagcctgcgcatccagaacgcc
atgagctgggacatgaccctggaggtcgcgatcgagggcgagcagggcgcgccggggttg
caggcatccatcgagcttccggcaggcccgccgcagaccctgctggtgccgttgcgggcg
gtttcgccagaggctctgggcatgcgtgcggggccgccgatgccgcagatggtcgaaggc
cagcgggtgctgctggcgccacgcgtggagggctcgctggaccgcgccagggtcggggcg
ctgagcctgtccctgcgctcgccgcaagctccccagagcatcctgctcggacgtttcggc
atacgcgcagggagggcggtggagcggagcatcctgaccggcctgatcgatcgctatggc
cagtacagccgcgccgactggtcggaaaagattcgttccgacgaacagttgcgcagcgcc
tatgcggccgaggccgcacagctccgcgactgggaacggcagacaccggcgcgcgaccgt
ttcggcggcctgctgggtgggccggtgttcgaagccagcggtttcttccgcacggaaaaa
cgtggcgggcgctggtggctggttactccggaaggacatccgttctggtcgctgggcgtt
aatgcggtgaccgccgacggcagccggacctacgtcgaaggacgcgagccgatgttcgcc
gaactgccggcggagggtgagccgctggcggcattcttcggtaagggcgacgaccgccgc
ggcgtcgccgcgcaggccgggcggcgcttcgggcatggccgctggttcgatttcctcggt
gccaatcgccagcgcatcgctccccaggcgagcgccgaccagctcgccggcgaatggcgc
cagcgcaccctggagcgcctctcggcatggggtttcaacagcctcggcaactggagcgat
ccggcgctcgccgcacaggcgcggatgccctacagcctgccgctgtcgatcgccggcgac
tacgccacggtcagcagcggtttcgactggtggggagccatgcccgatcccttcgacccg
cgcttcgccatggccgccgagcgcgtcatcgccatcgctgctcgcgaccaccgcgacgat
ccctggctgctcggctactacgccgacaacgaactggcctgggccgggcgcgacggctcg
gcccaggcgcgctacggcctcgctttcggagccttgacgctgtccatggacagtccggcg
aagcgcgccttcgtcaagcaattgaaagccaagtacctgggccatgaggcattggccgag
gcctggggcatcgagctggccgcctgggaggccctggaggcgccgggctacgcggctccg
ctgccgggcgaggggcatccggccatcgccgaggactacagcgccttcctccggctgtat
gccgacgcttacttcaagaccctgcgcgacgccctgcaatggcacgcaccgaaccacctc
ctgctcggcggccgcttcgccgtcagcactcccgaggcgatcacctcctgcgcccggtat
tgcgacctgctcagtttcaacctctatacgccgttgcccgggcagggcctggacgactcc
ctgctggcgcggctggacaagccggtgctgatcagcgagttccacttcggctcgcgggat
cgcggtccgttctggggtggtgtcagcgaggcggccaatgagcgggcgcgcggcgactcc
taccgaacgttcctggaggcggcgctgaagagtccgtatatcgtcggcgcccactggttc
cagtacctcgaccaaccggccagcgggcgtctgctggacggcgagaacggccatataggc
ctggtcgggatcacgggcttgccgttcgccggcttcgtcgacacggtgcgccgaagcaac
cttgccgccctgtcgcgactgtcggcgatggccaggtccatgcctgccgtcgagcctctg
ccgccgcgcgaggattcagccggttcatga
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