Pseudomonas aeruginosa SCV20265: SCV20265_3337
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Entry
SCV20265_3337 CDS
T02971
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCV20265_3337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paes03021
]
SCV20265_3337
Transcription machinery [BR:
paes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCV20265_3337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Rv2175c_wHTH
HTH_31
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AHC77451
LinkDB
All DBs
Position
complement(3567953..3568459)
Genome browser
AA seq
168 aa
AA seq
DB search
MGMDQTRNRLVGLMFQNDYSWLSGRLRRYLGCPHSAEDIASETFLKVLALPDPASIREPR
ALLTTIARRLMYDGWRRQDLERAYLESLAGLPEALAPSAEEQAQVVETLLRLERMLAGLS
PKARAAFIHSQIGGLTYVEIAGLLEVSVSRIHQYMVEGFKQCYQVLAE
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggatcagacacgcaatcgcctcgtcggcctgatgttccagaacgactattcc
tggctgagcgggcgcctgcggcgctacctcggctgcccccacagcgccgaggacatcgcc
tcggaaaccttcctcaaggtccttgccctgccggacccggcaagcatccgcgagccgcgc
gcgctgctcaccaccatcgcccgccggctgatgtacgacggctggcggcgccaggacctg
gaacgcgcctacctggaaagcctggccgggcttccggaggccctcgcgccgtccgccgag
gagcaggcccaggtggtggaaaccctgctgcgcctggagcgcatgctcgccgggctgtcg
ccgaaggcccgcgccgccttcatccatagccagatcggcggactgacctacgtggagatc
gccggcttgctggaggtttccgtcagccgcatccaccagtacatggtcgagggcttcaag
cagtgctaccaggtgcttgccgaatga
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