Pseudomonas aeruginosa SCV20265: SCV20265_4959
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Entry
SCV20265_4959 CDS
T02971
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
paes
Pseudomonas aeruginosa SCV20265
Pathway
paes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCV20265_4959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paes03019
]
SCV20265_4959
03110 Chaperones and folding catalysts [BR:
paes03110
]
SCV20265_4959
03029 Mitochondrial biogenesis [BR:
paes03029
]
SCV20265_4959
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paes04147
]
SCV20265_4959
Enzymes [BR:
paes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SCV20265_4959
Messenger RNA biogenesis [BR:
paes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCV20265_4959
Chaperones and folding catalysts [BR:
paes03110
]
Heat shock proteins
HSP60 / Chaperonin
SCV20265_4959
Mitochondrial biogenesis [BR:
paes03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SCV20265_4959
Exosome [BR:
paes04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCV20265_4959
Exosomal proteins of other body fluids (saliva and urine)
SCV20265_4959
Exosomal proteins of breast cancer cells
SCV20265_4959
Exosomal proteins of colorectal cancer cells
SCV20265_4959
Exosomal proteins of bladder cancer cells
SCV20265_4959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHC79065
LinkDB
All DBs
Position
complement(5261820..5263454)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELKDKFENMGAQLVKDVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATVAIVAQLKELAKPCADTKAIAQVGTISANSDESIGQIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPDTMAAELDSPLLLLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLSLEGATLEHLGNAKRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDY
DREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAIEGLKGDNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGNYGFNA
ATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVEDKPAMGGMPDMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaagttaagttcggcgattccgctcgcaagaaaatgctggtcggcgtg
aacgtgctggccgatgccgtcaaggccaccctcggcccgaaaggccgcaacgtggttctg
gacaagtccttcggcgctccgaccatcaccaaggacggcgtttccgtcgccaaggaaatc
gagctgaaagacaagttcgagaacatgggcgcgcaactggtgaaagacgttgcctccaag
gccaacgacgctgccggtgacggcaccaccaccgcgaccgtcctggcccaggccatcgtc
aacgaaggcctgaaggccgttgccgccggcatgaacccgatggacctgaagcgtggcatc
gacaaggccaccgtggccatcgtcgcccagctgaaagagctggccaagccctgcgccgac
accaaggccatcgcccaggtaggcaccatctccgccaactccgacgagtccatcggccag
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgtcgaggaaggc
tcgggcctggaaaacgaactgtccgtcgtcgaaggcatgcagttcgatcgcggctacctg
tccccctacttcgtgaacaagccggacaccatggccgccgagctggatagcccgctgctg
ctgctggtcgacaagaagatctccaacatccgcgaaatgctgccggtgctggaagccgtc
gccaaggccggccgtccgctgctgatcgtcgccgaggacgtcgagggcgaagccctggcc
accctggtggtgaacaacatgcgtggcatcgtcaaggtcgcggctgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgccatcctcaccggcggtaccgtg
atcagcgaagaagtcggcctgagcctggaaggcgctaccctggagcacctgggcaacgcc
aagcgcgtcgtgatcaacaaggaaaacaccaccatcatcgatggcgccggtgtgcaggct
gatatcgaagcccgcgtcctgcagatccgcaagcagatcgaggaaaccacttccgactac
gaccgcgagaagctgcaagagcgcctggccaagctggccggcggtgttgccgtgatcaag
gtaggcgctgcaaccgaagtcgagatgaaagagaagaaagcccgcgtcgaagacgccctg
cacgctacccgtgcagcggtggaagagggcgtggttcccggcggcggcgtagccctggtt
cgtgccctgcaagccatcgaaggcctgaagggtgacaacgaggagcagaacgtcggtatc
gccctgctgcgtcgcgccgtcgaatcgccgctgcgccagatcgtggccaacgccggcgac
gagccgagcgtagtggtcgacaaggtcaagcagggttccggcaactacggcttcaacgct
gctaccggcgtgtacggcgacatgatcgagatgggcatcctggacccggccaaggtcact
cgttccgctctgcaggctgcggcctccatcggcggtctgatgatcaccaccgaagccatg
gttgccgagatcgtggaagacaagccggccatgggcggcatgcctgacatgggcggcatg
ggcggcatgatgtaa
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