Pseudomonas aeruginosa PA38182: BN889_05017
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Entry
BN889_05017 CDS
T03031
Symbol
cafA
Name
(GenBank) cytoplasmic axial filament protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
paeu
Pseudomonas aeruginosa PA38182
Brite
KEGG Orthology (KO) [BR:
paeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paeu03019
]
BN889_05017 (cafA)
03009 Ribosome biogenesis [BR:
paeu03009
]
BN889_05017 (cafA)
Messenger RNA biogenesis [BR:
paeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN889_05017 (cafA)
Ribosome biogenesis [BR:
paeu03009
]
Prokaryotic type
rRNA processing factors
BN889_05017 (cafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CDI93044
LinkDB
All DBs
Position
complement(5214908..5216365)
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGRVVRVLPGMQAAFVDI
GLERAAFIHAAEISNREGSAVESISALVHEGQALVVQVTKDPIGTKGARLTTHLSIPSRY
LVYMPRTSHVGISLRIEDEVERERLKKVVADCVAAEGIEGQGGFILRTAAEGAGEDEILA
DIRYLRRLWDQIAAQIQTVGAPSVIYEDLSLAIRTLRDLVNPRIEKIRIDSRENFQKITS
FVEELMPEISDRLEHYPGERPIFDLYGVEDEIQKALERKVLLKSGGYLIVDPTEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHRRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLVQILCEPCPCCQGRGMLKTAETTCYEI
FREILREARAYQADSYLVLANQKVVDRLLDEESGNVADLEAFIGRTIKFQVEAMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagatcctgatcaatatcacgccgatggagtcgcgcgtggcggtggtggaa
aacggcgtcctgcaggaagtgcatgtcgaacgcacccagcggcgcggcatcgtcggcaat
atctacaaggggcgggtggtacgggtactgccggggatgcaggcggcgttcgtcgacatc
ggcctggaacgtgcggcgttcatccatgccgccgagatatccaatcgcgaaggcagcgcc
gtggaaagcatcagtgccctggtccatgaggggcaggcgctggtggtgcaggtgaccaag
gatccgatcggcaccaagggcgcacggctgaccacccacctgtcgattccttcgcgctat
ctggtgtacatgccgcgcaccagtcatgtcgggatatccctgcggatcgaggacgaagtc
gagcgcgagcgcctgaagaaggtggtggccgactgcgtggcggcggaaggcatcgagggg
cagggcggcttcatcctgcgcaccgctgcggaaggtgcgggcgaggacgagattctcgcc
gacatccgctaccttcgccggctatgggaccagatcgccgcgcagatccagaccgtcggc
gcgccttcggtgatctacgaagacctgtccctggcgatccgtacactgcgcgacctggtg
aacccgcggatcgagaagatccgcatcgactcgcgagagaacttccagaagatcacttcc
ttcgtcgaagaattgatgccggagatttccgatcgcctcgaacactacccgggcgagcga
ccgatcttcgatctctacggcgtcgaggacgaaatccagaaagccctggagcgcaaggta
ctgctgaagtccggcggctacctgatcgtcgatccgaccgaggcgatgaccaccatcgac
gtgaacaccggcgccttcgtcggccatcgcaacctcgaggaaaccatcttcaagaccaac
ctcgaggcggccaccgcgatcgcccgccagctgcgcctgcgcaacctgggcgggatcatc
atcatcgacttcatcgacatggaggacgaggagcatcgccggcaggtcctgcgcaccctg
gagaagcaactggagcgcgaccacgcgaagaccaacatcatcggcatcaccgagttgggc
ctggtgcagatgacccgcaagcgcacccgcgaaagcctggtgcagatcctctgcgagccg
tgcccctgctgccagggacgcggcatgctgaagactgcggaaaccacctgctacgagatt
ttccgcgagattctccgcgaggcgcgtgcctaccaggccgactcctacctggtgctggcc
aaccagaaggtggtggaccggctgctcgacgaggagtcgggtaacgtcgccgatctcgag
gcgttcatcggccgcaccatcaagttccaggtcgaggcgatgtactcgcaggagcaatat
gacgtggtcctgctctga
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