KEGG   Pseudomonas aeruginosa PA38182: BN889_05017
Entry
BN889_05017       CDS       T03031                                 
Symbol
cafA
Name
(GenBank) cytoplasmic axial filament protein
  KO
K08301  ribonuclease G [EC:3.1.26.-]
Organism
paeu  Pseudomonas aeruginosa PA38182
Brite
KEGG Orthology (KO) [BR:paeu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paeu03019]
    BN889_05017 (cafA)
   03009 Ribosome biogenesis [BR:paeu03009]
    BN889_05017 (cafA)
Messenger RNA biogenesis [BR:paeu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BN889_05017 (cafA)
Ribosome biogenesis [BR:paeu03009]
 Prokaryotic type
  rRNA processing factors
   BN889_05017 (cafA)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: CDI93044
LinkDB
Position
complement(5214908..5216365)
AA seq 485 aa
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGRVVRVLPGMQAAFVDI
GLERAAFIHAAEISNREGSAVESISALVHEGQALVVQVTKDPIGTKGARLTTHLSIPSRY
LVYMPRTSHVGISLRIEDEVERERLKKVVADCVAAEGIEGQGGFILRTAAEGAGEDEILA
DIRYLRRLWDQIAAQIQTVGAPSVIYEDLSLAIRTLRDLVNPRIEKIRIDSRENFQKITS
FVEELMPEISDRLEHYPGERPIFDLYGVEDEIQKALERKVLLKSGGYLIVDPTEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHRRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLVQILCEPCPCCQGRGMLKTAETTCYEI
FREILREARAYQADSYLVLANQKVVDRLLDEESGNVADLEAFIGRTIKFQVEAMYSQEQY
DVVLL
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgagcgaagagatcctgatcaatatcacgccgatggagtcgcgcgtggcggtggtggaa
aacggcgtcctgcaggaagtgcatgtcgaacgcacccagcggcgcggcatcgtcggcaat
atctacaaggggcgggtggtacgggtactgccggggatgcaggcggcgttcgtcgacatc
ggcctggaacgtgcggcgttcatccatgccgccgagatatccaatcgcgaaggcagcgcc
gtggaaagcatcagtgccctggtccatgaggggcaggcgctggtggtgcaggtgaccaag
gatccgatcggcaccaagggcgcacggctgaccacccacctgtcgattccttcgcgctat
ctggtgtacatgccgcgcaccagtcatgtcgggatatccctgcggatcgaggacgaagtc
gagcgcgagcgcctgaagaaggtggtggccgactgcgtggcggcggaaggcatcgagggg
cagggcggcttcatcctgcgcaccgctgcggaaggtgcgggcgaggacgagattctcgcc
gacatccgctaccttcgccggctatgggaccagatcgccgcgcagatccagaccgtcggc
gcgccttcggtgatctacgaagacctgtccctggcgatccgtacactgcgcgacctggtg
aacccgcggatcgagaagatccgcatcgactcgcgagagaacttccagaagatcacttcc
ttcgtcgaagaattgatgccggagatttccgatcgcctcgaacactacccgggcgagcga
ccgatcttcgatctctacggcgtcgaggacgaaatccagaaagccctggagcgcaaggta
ctgctgaagtccggcggctacctgatcgtcgatccgaccgaggcgatgaccaccatcgac
gtgaacaccggcgccttcgtcggccatcgcaacctcgaggaaaccatcttcaagaccaac
ctcgaggcggccaccgcgatcgcccgccagctgcgcctgcgcaacctgggcgggatcatc
atcatcgacttcatcgacatggaggacgaggagcatcgccggcaggtcctgcgcaccctg
gagaagcaactggagcgcgaccacgcgaagaccaacatcatcggcatcaccgagttgggc
ctggtgcagatgacccgcaagcgcacccgcgaaagcctggtgcagatcctctgcgagccg
tgcccctgctgccagggacgcggcatgctgaagactgcggaaaccacctgctacgagatt
ttccgcgagattctccgcgaggcgcgtgcctaccaggccgactcctacctggtgctggcc
aaccagaaggtggtggaccggctgctcgacgaggagtcgggtaacgtcgccgatctcgag
gcgttcatcggccgcaccatcaagttccaggtcgaggcgatgtactcgcaggagcaatat
gacgtggtcctgctctga

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