Pseudomonas aeruginosa M18: PAM18_1940
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Entry
PAM18_1940 CDS
T01973
Name
(GenBank) putative soluble lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
paf
Pseudomonas aeruginosa M18
Brite
KEGG Orthology (KO) [BR:
paf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paf01011
]
PAM18_1940
Enzymes [BR:
paf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PAM18_1940
Peptidoglycan biosynthesis and degradation proteins [BR:
paf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PAM18_1940
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_19
Motif
Other DBs
NCBI-ProteinID:
AEO74426
LinkDB
All DBs
Position
complement(2134274..2136202)
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AA seq
642 aa
AA seq
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MRGRLFTLVSCLLLSISFVDAVHAASLTEQRRLYDQAKAALAKGNSAPYMASRSALRDYP
LEPYLAYDELTHRLKSASNEEVERFLTEHGDLPQIGWLKLRWLRLLADRGDWKTFVNYYD
PKLNFTELDCLYGQYQLGHGQKAEGYATSERLWLVGKSQPAACDTLFGLWQGEGQLTEEK
VWKRLKLAAEARNYSLASHLAQRLPTLGNQGALMVSVAQNPAQLSQTGRFSQRDHATADV
VGLGLRRLARQDPEKALSLLDYYSSALPFSSDEKVAIAREIGLSLAKRFDPRALPLMTQY
DPGLRDNTVTEWRTRLLLRLGRWDEAYALTRKLPQDLAATSRWRYWQARSLQLAQPNSKE
PIALYQKLAGERDFYGFLAADRLSVPYKLGNRPAHIDPRVLQRVRNAASTRRAMEFFNRG
EVINARREWYHAARLFDRDELIAQARLAYDMQWYFPAIRSISQAQYWDDLDIRFPMAHRA
TLVREAKNRGLHSSWIFAITRQESAFMSDARSGVGATGLMQLMPGTAKETSRKFGIPLAS
TQQLIVPDVNIRLGAAYLSQVHGQFNGNRVLASAAYNAGPGRVRQWLKDTRHLAFDVWIE
TIPFDETRQYVQNVLSYAVIYGQKLNAPQPIVDWHERYFDDF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctgttcactctcgtttcctgccttttgctcagtatttccttcgtcgac
gcggtccacgccgcttccctgaccgaacaacgccgtctctacgaccaggccaaggccgcc
ctggccaagggcaacagcgcgccctacatggcctcgcgcagcgccctgcgcgattacccg
ctggaaccctacctggcctacgacgaactgacccatcggctgaagtccgccagcaacgag
gaggtcgagcgcttcctcaccgaacacggcgacctgccgcagatcggctggctgaaactg
cgctggctgcgcctgctggccgaccgcggcgactggaagaccttcgtcaactactacgat
ccgaagctgaacttcaccgaactcgactgcctgtatggccagtatcagctgggccacggc
cagaaggccgaaggctacgccaccagcgaacgcctgtggctggtcggcaagtcgcagccg
gctgcctgcgacaccctgttcggcctctggcagggcgaaggccagctcaccgaggaaaag
gtctggaaacgcctcaagctggccgccgaagcgcgcaactacagcctcgcctcgcacctc
gcgcagcgcctgccgaccctcggcaaccagggcgcgctgatggtcagcgtggcgcagaac
cccgcccagctgagccagaccggccgcttcagccagcgcgaccatgccaccgccgacgtg
gtcggtctcggcctgcgccgcctggcgcggcaggacccggaaaaggcccttagcctgctc
gactactacagctcggcgctacccttctccagcgacgagaaggtcgccatcgcccgcgag
atcggtctcagcctggccaagcgcttcgatccgcgcgcactgccgctgatgacccagtac
gatcccggcctgcgcgacaacaccgtcaccgaatggcgcacccgcctgctgctgcgcctg
ggccgctgggacgaagcctacgcgctgacccgcaagctgccccaggatcttgccgccacc
agccgctggcgctattggcaggcacgcagcctgcaactggcgcagccgaacagcaaggag
ccgatcgcgctgtaccagaagctcgccggcgagcgcgacttctacggcttcctcgccgcc
gaccgcctgagcgtgccgtacaagctcggcaaccgtcctgcgcacatcgacccgcgcgtc
ctgcaacgcgtacgcaacgccgccagtacgcgccgggccatggagttcttcaaccgtggc
gaagtgatcaacgcccgccgcgagtggtaccacgccgcgcgcctgttcgatcgcgacgag
ctgatcgcccaggccaggctggcctacgacatgcagtggtatttcccggcgatccgctcg
atcagccaggcgcagtactgggacgacctggacatccgcttcccgatggcgcaccgcgcc
accctggtgcgcgaagcgaagaaccgcggcctgcactccagttggatcttcgccatcacc
cggcaggaaagcgcgttcatgtccgatgcccgttccggagtcggcgccaccgggctgatg
cagctgatgcccggcaccgccaaggagacctcgcgcaagttcggcatcccgctggcctcg
acccagcaactgatcgtgcccgacgtcaacatccgcctcggcgccgcctacctgagccag
gtgcatggccagttcaacggcaaccgggtactcgcctcggccgcctacaacgccggtccg
ggccgcgtccgccagtggctgaaagatacccgccacctggccttcgacgtgtggatcgag
accattccgttcgacgagactcgccagtacgtgcagaacgtgctgtcctatgcggtgatc
tacgggcagaagctcaatgcgccgcagcccatcgtcgactggcacgaacgctacttcgac
gatttctga
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