Pseudomonas aeruginosa LESB58: PLES_48561
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Entry
PLES_48561 CDS
T00818
Symbol
cafA
Name
(GenBank) cytoplasmic axial filament protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pag
Pseudomonas aeruginosa LESB58
Brite
KEGG Orthology (KO) [BR:
pag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pag03019
]
PLES_48561 (cafA)
03009 Ribosome biogenesis [BR:
pag03009
]
PLES_48561 (cafA)
Messenger RNA biogenesis [BR:
pag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PLES_48561 (cafA)
Ribosome biogenesis [BR:
pag03009
]
Prokaryotic type
rRNA processing factors
PLES_48561 (cafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CAW29610
LinkDB
All DBs
Position
complement(5342340..5343797)
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGRVVRVLPGMQAAFVDI
GLERAAFIHAAEISNREGSAVESISALVHEGQALVVQVTKDPIGTKGARLTTHLSIPSRY
LVYMPRTSHVGISLRIEDEDERERLKKVVADCVAAEGIEGQGGFILRTAAEGAGEDEILA
DIRYLRRLWDQIAAQIQTVGAPSVIYEDLSLAIRTLRDLVNPRIEKIRIDSRENFQKITS
FVEELMPEISDRLEHYPGERPIFDLYGVEDEIQKALERKVLLKSGGYLIVDPTEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHRRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLVQILCEPCPCCQGRGMLKTAETTCYEI
FREILREARAYQADSYLVLANQKVVDRLLDEESGNVADLEAFIGRTIKFQVEAMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagatcctgatcaatatcacgccgatggagtcgcgcgtggcggtggtggaa
aacggcgtcctgcaggaagtgcatgtcgaacgcacccagcggcgcggcatcgtcggcaat
atctacaaggggcgggtggtacgggtactgccggggatgcaggcggcgttcgtcgacatc
ggcctggaacgtgcggcgttcatccatgccgccgagatatccaatcgcgaaggcagcgcc
gtggaaagcatcagtgccctggtccatgaggggcaggcgctggtggtgcaggtgaccaag
gatccgatcggcaccaagggcgcacggctgaccacccacctgtcgattccttcgcgctat
ctggtgtacatgccgcgcaccagccatgtcgggatatccctgcggatcgaggacgaagac
gagcgcgagcgcctgaagaaggtggtggccgactgcgtggcggcggaaggcatcgaggga
cagggcggcttcatcctgcgcaccgccgcggaaggcgcgggcgaggacgagattctcgcc
gacatccgctaccttcgccggctatgggaccagatcgccgcgcagatccagaccgtcggc
gcgccttcggtgatctacgaagacctgtccctggcgatccgtacactgcgcgacctggtg
aacccgcggatcgagaagatccgcatcgactcgcgagagaacttccagaagatcacttcc
ttcgtcgaagaattgatgccggagatttccgatcgcctcgaacactacccgggcgagcga
ccgatcttcgatctctacggcgtcgaggacgaaatccagaaagccctggagcgcaaggta
ctgctgaagtccggcggctacctgatcgtcgatccgaccgaggcgatgaccaccatcgac
gtgaacaccggcgccttcgtcggccatcgcaacctcgaggaaaccatcttcaagaccaac
ctcgaggcggccaccgcgatcgcccgccagctgcgcctgcgcaacctgggcgggatcatc
atcatcgacttcatcgacatggaggacgaggagcatcgccggcaggtcctgcgcaccctg
gagaagcaactggagcgcgaccacgcgaagaccaacatcatcggcatcaccgagttgggc
ctggtgcagatgacccgcaagcgcacccgcgaaagcctggtgcagatcctctgcgagccg
tgcccctgctgccagggacgcggcatgctgaagactgcggaaaccacctgctacgagatt
ttccgtgagatcctccgcgaggcgcgtgcctaccaggccgactcctacctggtgctggcc
aaccagaaggtggtggaccggctgctcgacgaggagtcgggtaacgtcgccgatctcgag
gcgttcatcggccgcaccatcaagttccaggtcgaggcgatgtactcgcaggagcaatat
gacgtggtcctgctctga
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