KEGG   Pyrobaculum aerophilum: PAE0117
Entry
PAE0117           CDS       T00073                                 
Name
(GenBank) hypothetical protein
  KO
K19143  CRISPR-associated protein Csx1
Organism
pai  Pyrobaculum aerophilum
Brite
KEGG Orthology (KO) [BR:pai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pai02048]
    PAE0117
Prokaryotic defense system [BR:pai02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-U factors
    PAE0117
SSDB
Motif
Pfam: Cas_DxTHG Sin3a_C Glyco_trans_4_4 HTH_Tnp_Tc3_2
Other DBs
NCBI-ProteinID: AAL62572
UniProt: Q8ZZR7
LinkDB
Position
complement(64616..66046)
AA seq 476 aa
MKFLVVAPWGNPSMWRRARYRIELRHKALEGLGEGEVETCSSTKALAELLRRRGDVKVLI
FGLDTVAQPAGGRTPREIAEEKYREWARALGVEGEVVSLPGIGLFHGWRYEGKPLHLFNA
AFYHILKTAEELKPSFIVVDLTHGVNYQTIAVLYAAVAASVLLEKEDRLLLYNSEPYPAE
YSAETCIKEAQRVERREGVPQLTALDVRQLQDAVGAIRLLWALRRLAPLKIDVEIQSPEL
RRRFDKVITSYRLLASGAAALLFPKAKFSGRAPEFYVPGEGPGAVPEPRIDIKVDPDRRV
VSYGEADEMYSVAVALHYLERALDELRAEDLVSFLNRVAKHYKEIGVTLTSIVVDTTAKQ
LGRMVKAAEALADKGVLKRIDGVIELSQLEAMVLFERSNRALELAASWRQALDEFAKVLS
GEMERKISDRTLRNLLAHGGYSHVAVEKVVIKDKKIVEVVYNGEIVSELVQRLKTN
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgaagtttttggtcgtggcgccgtgggggaacccgtcaatgtggcgccgcgcgaggtac
agaattgagctgaggcacaaggcgcttgagggtttgggcgagggtgaggttgagacgtgt
agctccactaaggcgcttgctgagttgctgaggcgtaggggcgatgtcaaggtgttgatc
ttcggccttgacacagtggcgcaaccggcggggggccgaactccgcgcgaaatcgctgag
gagaagtacagggagtgggccagggcgctgggagtggagggggaggttgtctcgctcccg
ggcattgggcttttccacggctggaggtacgaggggaagccgcttcacttgttcaacgcg
gctttttaccacatacttaagactgcggaggagctcaagccctcatttatcgtggtggac
ctcacccacggggttaattaccaaactattgcggttctctacgcggccgtggccgcctct
gtcctgctggagaaagaggataggcttctgctctacaactcagagccctaccccgcggag
tacagcgccgagacgtgtattaaggaggcgcaacgcgttgagaggagggagggggtgcct
cagctgacggcgcttgacgtgagacaactgcaagacgccgtaggcgccataaggctcctc
tgggcgctgaggaggctggcccccttgaaaattgacgtcgagatacagtcgccggagttg
cgcagaaggtttgataaagtcattacgtcgtaccgcctcttggcctcaggcgccgccgcg
ttgctctttcccaaggccaagttttcggggagggcgccggagttttacgtgccgggcgag
gggcctggggcggtgccggagccgcggattgatataaaagtggaccccgataggcgcgtt
gtttcatacggcgaggccgacgagatgtattcagtggccgtcgcgctccactacttggag
agggccctcgacgaactccgcgcagaggacttggtgagttttctcaacagagtagcaaaa
cactacaaggagattggcgttactctaaccagcatagttgtagacacaaccgccaagcag
ttgggcagaatggtgaaggcggctgaggccttggccgacaagggggttttaaagagaata
gacggcgttatagagctgtcgcaactagaggccatggtcttgtttgagaggagcaacaga
gctcttgagcttgcggcttcctggcggcaggctctggacgaattcgccaaagtgctcagc
ggcgagatggagcgcaaaatatccgataggacgctccgcaatttgctcgcccacgggggc
tacagccacgtggccgtggagaaggtggtgattaaagacaagaaaatagtggaagtcgtg
tacaacggcgagattgtttcggagctggtccagaggctaaaaactaattaa

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