Pyrobaculum aerophilum: PAE2991
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Entry
PAE2991 CDS
T00073
Name
(GenBank) conserved hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pai
Pyrobaculum aerophilum
Pathway
pai03022
Basal transcription factors
pai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAE2991
09124 Replication and repair
03420 Nucleotide excision repair
PAE2991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pai03021
]
PAE2991
03400 DNA repair and recombination proteins [BR:
pai03400
]
PAE2991
Enzymes [BR:
pai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PAE2991
Transcription machinery [BR:
pai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PAE2991
DNA repair and recombination proteins [BR:
pai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PAE2991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAL64594
UniProt:
Q8ZU14
LinkDB
All DBs
Position
1779264..1781006
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AA seq
580 aa
AA seq
DB search
MELFPYAEYRPFQRKIYQKVVEALKRGRTALINAPTGIGKTSAVLAAAVEFMLETRIPVH
YAVRTRAELEAPVRELARIISLGVDIDHVVIKSRQDMCCYSELKKLGYLEFLAECNLLKR
LGKCAYYPPRDVEAPLKNVSTYVKFLCAAKSCPYEYARKKLENAEVTISTYYYVFGRDGG
GVKNKVVIIDEAHSVFDAVIHLNSIKISERELRQAYREARKYGFVEEAAGVYRLYTFVKK
VSGHVDLGDVISLLADLDVDNAVREITKIKSMNRLNPFTPLVLISELKEALKGGLRYYAQ
IEEAEGLKALALYPVDPAAVVKEALRGAYSVVYISGTLPVRLFADNLGLAEYDELDVPFN
AYIPRANYLTIIDVGVTTKYSERTEEMYYQIAHRLAVCINASPRGVLAVFPSYDVMKGVR
KYLKVTIPHWYEDRNEVEWEGLPEKFFLGGVARGRYAEGVEYTKNGVNLLSTVVIVGVPY
PEPSPYLDRRVAMLKPRLGERAWSAVYLYQAMVSVRQAVGRLFRKPEDRGVIVLLDRRYA
EPELWNSLSDLVEGALVVNHVEEAVEDVERFFNAWSKDAK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtggagttattcccctatgcggaataccggccgtttcagcggaagatttatcagaaggta
gtcgaggctcttaaacgggggaggacggcattgataaacgcccccactggcattgggaaa
acttctgcggtgttggccgccgctgttgaattcatgttagaaactagaatacctgtacat
tacgctgttaggacgcgggctgagctcgaggcgccggttagagaacttgcgagaataatt
agcctgggagtagatattgatcacgtcgttataaaaagcagacaagacatgtgttgttat
tctgaacttaaaaaacttgggtatctggagttcctcgccgagtgtaacctcttaaaacgc
cttgggaaatgtgcttattaccctccgagggatgtggaagcccctttgaaaaacgtcagt
acatatgtcaagtttttatgcgccgcgaagagctgtccctacgagtatgcccgtaagaag
ttagaaaacgcagaggtgaccatttcaacttattactatgtctttggcagagacggagga
ggcgttaagaacaaagtcgtaattatagacgaggcgcactcggtgtttgacgccgtaatt
cacttaaatagtattaaaataagcgagagggagttgagacaggcctatagagaggcccgt
aaatacggctttgtagaggaggcggcgggagtttaccgcctttatacatttgtaaaaaaa
gtctctgggcatgtggatttgggagatgtcataagcctattggcggatttagacgtagac
aacgccgtgagggagattactaaaattaagtctatgaacaggctaaaccccttcacccct
ctcgttttgattagcgagctcaaggaggcgcttaagggggggctccgttactatgcacaa
atagaagaagctgagggcttgaaggccctggcattataccccgtagacccggcggctgtg
gtgaaagaggcgctacgcggcgcatatagcgtagtttatataagcgggactctcccagtt
aggctgttcgccgacaatttgggactggcggaatacgacgagcttgacgtcccgttcaac
gcctatataccgcgggccaactaccttaccattatagacgtgggagttactactaaatac
tccgagcgtacagaggagatgtactaccaaatagctcatagattggcagtatgtattaac
gcgtcgccgaggggcgttttggccgtattcccctcatacgacgtcatgaagggggtgagg
aagtacttgaaggtgacaattccgcattggtatgaagacagaaatgaagtggagtgggag
ggcctgcccgagaagtttttcctaggcggagtggcccgtggaaggtacgcagagggggtt
gagtacacaaaaaacggggtgaatctgctgtccactgtggtaatcgtgggagtcccctat
ccagagccgtctccgtatttagacaggagggtagccatgttgaagccgcggctgggggag
agggcttggagcgctgtgtatttataccaagcgatggtaagcgttaggcaggccgttggc
cgtcttttcagaaagccggaggataggggggtgatagtcctcttagacaggcgctatgcc
gagcccgagttatggaacagcctatccgatctagtagaaggcgccctggtggtcaaccac
gtggaagaggccgtggaggacgtggagaggttttttaacgcctggtcaaaagacgccaaa
tag
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