KEGG   Pantoea ananatis AJ13355: PAJ_1576
Entry
PAJ_1576          CDS       T01969                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
paj  Pantoea ananatis AJ13355
Pathway
paj02020  Two-component system
paj02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:paj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PAJ_1576 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    PAJ_1576 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paj03021]
    PAJ_1576 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:paj02035]
    PAJ_1576 (fliA)
Transcription machinery [BR:paj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PAJ_1576 (fliA)
Bacterial motility proteins [BR:paj02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    PAJ_1576 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 Sacchrp_dh_C UPF0122 GerE zf-C4H2
Other DBs
NCBI-ProteinID: BAK11656
UniProt: A0A0H3KX66
LinkDB
Position
complement(1896858..1897550)
AA seq 230 aa
MDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYDALQGTAFTTY
AVQRIRGAMLDELRSRDWAPRSVRRNAREVAGAMHQVEQMLGRAASEQEVAQQLNVSIEE
YRQILLDTNNSQLFSYDEYREEHGDSAELVTEGHEEANPLHQLMEGSLRERVIEAIEALP
EREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLTGAR
NT seq 693 nt   +upstreamnt  +downstreamnt
atggacaaacattcgctctggcagcgctacgtaccactggtacgtcatgaagcactgcgc
ttgcaggtccgcctgccagccagtgttgaacttgacgatctgcttcaagccgggggcatt
ggtctgttgaatgcggtggagcgctatgacgcactccagggtaccgcctttaccacgtat
gcagtacagcgcatccgtggagccatgcttgatgagcttcgcagtagggactgggcacca
cgtagcgtcagacgaaatgctcgcgaggttgcgggagccatgcatcaggttgaacagatg
ctgggccgcgctgcctctgagcaggaagtcgcgcaacagttgaatgtttcgatagaagag
taccggcagattctgttggataccaacaacagccaactcttttcgtacgacgagtatcgg
gaagaacacggtgacagtgcggaactggtgacggaagggcacgaagaggccaatccactt
catcagttgatggaagggagtctgcgtgaacgcgtcattgaagcgatcgaggccttgccc
gaacgcgaaaagatggtgctgacactgtactaccaggaagaactgaatctgaaagagatt
ggcgcggttcttgacgtgggggaatcccgagtcagccaactgcacagtcaggcgataaaa
cgcttgcgtgcccgacttacgggagcgcgctag

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