Pantoea ananatis AJ13355: PAJ_2174
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Entry
PAJ_2174 CDS
T01969
Symbol
yfhD
Name
(GenBank) lytic transglycosylase Catalytic YfhD
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
paj
Pantoea ananatis AJ13355
Brite
KEGG Orthology (KO) [BR:
paj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paj01011
]
PAJ_2174 (yfhD)
Enzymes [BR:
paj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PAJ_2174 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
paj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PAJ_2174 (yfhD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
LysR_substrate
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
BAK12254
UniProt:
A0A0H3L5X8
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All DBs
Position
2638024..2639307
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AA seq
427 aa
AA seq
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MNKAPAGMDYELAKRFADYLGVKLDITVRANLSDLFDALDDGKADLLAAGLIYNDERLSR
YQIGPGYYSVSQQLVYRVDKPRPKNLGDLKGRLVVASGSAYLSTLKNARANHYPDLDWAI
STDQSPKALLEAVAEGKLDYTIGDSVTIALLQRIHPQLAVAFDVTDEEPVTWYLPHESDD
SLNAAMLDFFNSMGEEGAMARLEEKYLGHVGTFDYVDTRTFLRSIDNVLPDIKPLFEKYA
KNIDWRLLAAISYQESHWNPQATSPTGVRGMMMLTRNTADSVDVGDRTDPEQSIRGGSEY
LQNMMEKVPQTIPEDERIWFALAAYNMGYAHMLDVRKLTAKQGGNPDSWADVKLRLPMLS
QKRYYSQTTYGYARGQEAYNYVENIRKYEISLVGYLQEQEKRIAQQAALEAELGKGYPAV
TPEVAMN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaccggccgggatggactacgagctggcgaagcgttttgccgattatctg
ggcgttaagcttgatataacggtgcgcgccaacctcagcgatctgttcgatgcgctcgac
gacggcaaagcggatctgctggcggcaggtctgatttataacgatgagcgtttgtcgcgt
tatcagatcggcccgggctactacagcgtttcgcagcagctggtctatcgcgtggacaaa
ccgcggccaaaaaacctgggtgacttaaaggggcggctggttgttgcctctggatcggct
tatctgtcgacacttaaaaacgcccgggcgaatcactatcccgatctcgactgggccatt
tcgaccgatcaaagtccgaaagccctgctggaagccgtggctgagggcaagctggattat
acgattggcgattccgtgacgattgccctgcttcagcgcattcatccccaactggccgtg
gctttcgacgtcaccgatgaagaaccggtaacgtggtatttaccgcacgaaagcgatgac
agcctgaacgccgccatgctggatttctttaacagcatgggagaagaaggggcgatggca
agacttgaagagaaatatctcggtcacgtcggcaccttcgactacgtggatacccgcacc
ttcctgcgctccattgataacgtgctgcccgatataaaacccctgtttgaaaagtacgcc
aaaaatatcgactggcggctgctggcggcgatttcctatcaggagtcgcactggaatccg
caggcgacgtcgcctaccggcgtccgcggcatgatgatgttaacgcggaataccgctgac
agcgttgacgtaggtgaccgtaccgatcctgagcagagcatccgtggcggcagcgagtat
ctgcaaaacatgatggaaaaggtgccacaaacgattccggaagatgagcgtatctggttt
gccctggcggcctataacatgggctatgcgcatatgctggatgtgcgtaagctcacggct
aaacagggtggaaatcccgacagctgggcagatgtcaaactgcggctacccatgttgagc
cagaagcgctactactcacaaaccacctatggctatgcacgcgggcaggaagcctataat
tacgtggagaatatccgcaaatatgaaattagcctggtgggttatttgcaggagcaggaa
aaacgcattgcccaacaggcggccctggaggcagagctgggcaaaggttatcctgccgtc
acgcctgaggtggcaatgaattaa
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