KEGG   Pseudomonas alcaligenes: A0T30_09455
Entry
A0T30_09455       CDS       T04318                                 
Name
(GenBank) peptigoglycan-binding protein LysM
  KO
K08086  pilus assembly protein FimV
Organism
palc  Pseudomonas alcaligenes
Brite
KEGG Orthology (KO) [BR:palc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palc02044]
    A0T30_09455
Secretion system [BR:palc02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   A0T30_09455
SSDB
Motif
Pfam: TPR_19 TPR_14 TPR_16 TPR_4 FlxA TPR_6 DivIC DUF6584 TPR_11 ATG14 SPATA24 TPR_10 Cortex-I_coil YfdX
Other DBs
NCBI-ProteinID: AMR66578
LinkDB
Position
2058719..2061502
AA seq 927 aa
MVRVRKLVLAIAAASALTSGTAHALGLGEIDLQSSLSQPLVAEIELLEVRDLAQGEVIPS
LASPEEFNKAGVDRQYFLTDLKFTPVIKPNGKSVIRITSTKPVREPYVNFLVEVLWPNGR
LLREYTLLLDPPMYAPTPVVSSAPRLPVATAPAPRPQTVAPTPRPVTPSASAPVRPAAPA
APAPAAASKIEGDQYKTTSSDTLWEIAQSSRQSGTVHQAMLAILDLNPNAFVGGNINRLK
SGQVLRLPTDAQIKSRSQAEALAQVSEQNNAWREGRSVAASTSRQLDATKRDSAGAAPAK
AESKDSLKLVSADSGKSTAGSEKGKGDSKALNDQLAVTKESLDSTRRENDELKGRMSDLQ
SQVDKLQRLIELKDNQLAKLQSDLAQQGKAAAPAQPATPAAEVKPAAPVTEVKPAEVKPA
EVKPAEKPAATDFNYEEPAVKSEPVKPAEKPVAPAAEKPAQPAKPVQPAKPVAPVVKEPE
PQSMLDELLANPMLLGAVGGGALLALLIGLMVLSRRNAMKEAELQGSLAPESTSDSFASE
MDLPDDSFAGLDDASDDTQVRDKAEERVAPQTADALGEADIYIAYGKFTQAAELLQNALN
DEPQRGDLRLKLMEVYAELGDRDGFARQEQELREIGGSAGAVDQLKAKYPAMVAAAFAGG
TAVAAADNDLDSFSLDDLTLDEPVAKPAAAPVDLDDSFDLSLDDLDVGLDEPAAPAAVAE
TTLDDLGLDFDTPAAPASTAAADMEFDLDLGGDGAGDSLSLGDDLADFSLELETESKPAA
AAVEDDFMLSLDDEPVAPAASGSDLELDMPADFDLSLADETPSTPAEDSFAAQLDEVSAE
LNELSSGLADELPVAQPEAAPAAAGLDMDDDFDFLSGTDETATKLDLARAYIDMGDSEGA
RDILDEVIAEGSEGQQQEARELISKLS
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggttcgggttcgcaaactggtgctggcaattgcggctgcttccgcgctgacctccggt
acggcacatgcactgggactgggagaaatcgacctgcagtcctcgctgagccagccgctg
gtagcggaaatcgagttgctcgaggtgcgtgacctggctcagggcgaggtaatccccagc
ctggcgtcacccgaggagttcaacaaggccggcgtcgatcgtcagtacttcctgactgac
ctcaagttcacgccggtcatcaagcccaacggcaagagcgtgattcgcatcacctccacc
aagccggtgcgcgagccctacgtcaacttcctggtcgaagtgctgtggcccaatggccgc
ctgctgcgtgaatacaccctgctgctcgacccgccgatgtacgcgccgaccccggtggtc
agcagcgcgccgcgtctgcccgtagccaccgctccggcaccgcgcccgcaaaccgttgcg
ccgaccccgcgcccagttactccttcggccagtgctccggtgcgtccggctgctccagct
gcgccggctcccgctgcggcaagcaagatcgagggggatcagtacaagaccacctccagc
gacacgctttgggaaatcgcccagagcagccgccagagtggcaccgtgcaccaggcgatg
ctggcgattctcgacctcaacccgaatgccttcgtcggcggcaacatcaaccgcctgaaa
agcggccaggtgctgcgtctgcccaccgatgcgcagatcaagagtcgcagccaggctgaa
gcgctggctcaggtctccgaacagaacaatgcctggcgcgaaggtcgcagcgtagcggcc
agtacctcgcgtcagctggatgccaccaaacgcgacagcgcgggcgccgccccggccaag
gccgagagcaaagacagtctgaaactggtgtctgccgactccggcaagtccactgcgggc
agcgagaagggcaagggcgacagcaaggcgctcaatgaccagctggctgttaccaaggag
agcctggactcgactcgtcgtgaaaacgacgagctgaaagggcgcatgagcgacctgcag
agccaggtggacaagctgcagcgcctgatcgagctcaaggataatcagctggccaagctg
cagagcgatcttgctcagcagggcaaggccgccgctccggcccagccggccactccggct
gccgaagtcaagccagcggcgccggtcaccgaggtcaagcctgccgaggtcaagccggcg
gaagtgaagccggccgagaaaccggcggctactgacttcaattacgaagagccggcagtg
aaaagcgagccggtcaagcctgccgagaagccggtagccccggctgcggaaaaaccggcc
caaccggccaagcctgtgcagccggccaaaccggttgccccggtggtcaaggagcccgag
cctcagagcatgctcgatgagctgctggccaaccccatgctgctcggcgccgtgggtggt
ggtgctctgctggccctgctcattggtctgatggtgctgtcgcgtcgcaacgccatgaag
gaagccgagctgcagggcagcctagctcccgaatcgaccagtgactcctttgccagcgag
atggatctgccggatgacagctttgccggtctggacgatgcctccgatgacacccaggta
cgtgacaaggctgaagagcgcgttgctccgcagaccgccgatgcgctgggcgaagccgac
atctacatcgcctatggcaagttcactcaggccgccgagttgctgcagaacgcgctcaat
gacgagccgcagcggggcgacctgcgcctcaagctgatggaagtctatgccgagctcggt
gatcgcgatggctttgcccgtcaggagcaggagctgcgcgagatcggcggctccgccggt
gccgtcgaccagctgaaggccaagtacccggccatggttgccgctgcctttgccggtggg
accgccgttgctgccgccgacaacgatctggacagcttcagcctggatgatctgaccctc
gacgagccggttgccaagcctgccgccgcgccggtcgatctggatgactccttcgacctg
agcctggatgatctggatgtagggctcgacgagcctgcagctcccgctgctgtcgccgaa
acgaccctggacgacctgggcctggatttcgatacgcctgccgctccggccagcaccgct
gcggctgacatggagttcgatctggatctgggtggcgatggcgcaggcgacagcctgtcg
ctcggcgacgatctggctgatttcagcctggaactggagaccgagagcaagccggctgct
gccgctgtcgaagacgacttcatgctcagtctggatgatgagcccgtcgctccggctgcc
tcgggcagcgatctcgagctggacatgccggccgatttcgatctgtcgttggccgacgag
actccctccaccccggctgaggacagcttcgctgcacagctggacgaggtatctgccgag
ctgaacgaactgagcagcggtctggctgacgaactgccggttgcgcagcccgaagccgcc
cccgccgcagcaggtctggacatggacgacgacttcgacttcctctcgggtaccgacgag
accgctaccaagctggacctggcccgtgcctacatcgacatgggtgatagcgaaggtgcc
cgcgacatcctcgacgaagtgatcgccgagggtagcgaaggccagcagcaggaagcgcgc
gagctgatctccaagctgagctga

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