Pseudomonas alcaligenes: A0T30_10640
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Entry
A0T30_10640 CDS
T04318
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
palc
Pseudomonas alcaligenes
Pathway
palc00330
Arginine and proline metabolism
palc01100
Metabolic pathways
palc01110
Biosynthesis of secondary metabolites
Module
palc_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
A0T30_10640
Enzymes [BR:
palc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
A0T30_10640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Colicin-DNase
Motif
Other DBs
NCBI-ProteinID:
AMR66792
LinkDB
All DBs
Position
2309351..2311591
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AA seq
746 aa
AA seq
DB search
MYKDLNFPILIVHRDIKADTVAGERVRAIAEELGKDGFTILSTASSAEGRIVASTHHGLA
CILVAAEGAGENQRLLQDMVELIRIARVRAPQLPIFALGEQVTIENAPADAMADLNHLRG
ILYLYEDTVSFLARQVARAAHNYLDGLLPPFFKALVQHTAQSNYSWHTPGHGGGVAYRKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHSMVGRDDLVLVDRNCHKSILHSIIMTGAIPLYLCPERNELGIIGPIPLSEFS
KESIQAKIDASPLARGRAPKVKLAVVTNSTYDGLCYNAEMVKQALGDSVEVLHFDEAWYA
YAAFHEFYAGRYGMGTRCEAHSPLVFSTHSTHKLLAAFSQASMIHVQDGGARQLDRDRFN
EAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALANLRQNLAVDD
WWFSIWQPDQAGGEGVHTGDWLLQPNADWHGFGEIAEDYVLLDPIKVTLVMPGLSADGRL
TEAGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRLYDANV
PLLDALPSIAREGGARYAGMGLRDLCDELHGCYRENATAKALKHMYTVLPQVAIKPADAY
DKLVRGEVEAVPIEQLEGRLAAVMLVPYPPGIPLIMPGERFTAETRSIIDYLQFARTFDS
QFPGFDADVHGLQRDGACYTVDCIKE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagacctgaacttccccatcctcatcgtccatcgcgacatcaaggccgacacc
gtcgccggcgagcgcgtccgcgctatcgccgaggaactgggcaaggatggcttcaccatc
ctgtccaccgccagctccgccgaggggcgcatcgtcgcctccacccaccacggcctggcc
tgcatcctggtagccgccgagggagcgggggagaaccagcgtctgctgcaggacatggtc
gagctgatccgcatcgcccgtgtgcgcgcgccgcagctgccgatcttcgctctcggcgag
caggtcaccatcgagaacgccccggccgacgccatggctgatctcaaccacctgcgcggt
attctctacctctacgaagacaccgtgtccttcctcgcccgccaggtggcgcgcgcggcg
cacaactacctcgacggcctgctgccgccgttcttcaaggcgctggtgcagcacaccgcg
cagtccaactactcctggcacacgcccggccatggcggcggcgtggcctaccgcaagagc
ccggtggggcaagccttccaccagttctttggcgaaaacacgctgcgctcggacctctcg
gtgtcggtgcccgagctgggctcgctgctcgaccataccggcccgctggccgaggccgag
gcccgtgccgcgcgcaacttcggcgctgaccacaccttcttcgtgatcaacggcacttcg
acggcgaacaagatcgtctggcactcgatggtcggccgcgacgacctggtgctggtggac
cgcaactgtcacaagtcgatcctccattcgatcatcatgaccggcgccatcccgctgtac
ctgtgcccggagcgcaacgagctgggcattatcgggccgattccgctttccgaattcagc
aaggagtcgatccaggccaagatcgacgccagcccgctggcccggggccgcgcgcccaag
gtcaagctggcggtggtgaccaactccacctacgacggcctctgctacaacgccgagatg
gtcaagcaggctctgggggactcggtggaagtgctgcacttcgatgaggcctggtacgcc
tacgccgccttccacgagttctacgccgggcgctacggcatgggcacccgctgcgaggcg
cattcgccgctggtgttcagcacccactccacgcacaagctgctggcggccttcagtcag
gcctcgatgatccatgtgcaggacggtggcgcgcgccagctggaccgtgaccgcttcaac
gaagccttcatgatgcacatctccacctcgccgcagtacggcatcatcgcctcgctggac
gtggcctcggcgatgatggaaggcccggccgggcgctcgctgatccaggaaaccttcgac
gaagcactgagtttccgtcgcgccctggccaacctgcggcagaacctggcagtggacgac
tggtggttcagcatctggcagccggaccaggccggcggcgagggcgtgcacaccggcgac
tggctgctgcagcccaacgccgactggcacggcttcggcgaaatcgccgaggactacgtg
ctgctcgacccgatcaaggtcaccctggtgatgccggggctgtccgccgacggcaggctg
accgaggccggcattcccgcggcggtggtcagcaagttcctctgggagcgtggcctggtg
gtggagaagaccggtctgtattccttcctggtgctgttctccatgggcatcaccaagggc
aagtggagcaccctgctcaccgagttgctggagttcaagcgcctgtacgacgccaacgtg
ccgctgcttgatgcactgccgtcgatcgcccgcgagggcggggcgcgctacgccggcatg
ggcctgcgcgacctgtgcgatgagctgcacggctgctaccgcgaaaatgccacggccaag
gcactcaagcacatgtacacggtgttgccgcaggtggcgatcaagccggccgatgcctac
gacaagctggtgcgcggtgaggtcgaggcggtgcccatcgagcagctggaaggccgcctg
gcggcggtgatgctggtgccttatccgccgggcattccgctgatcatgccgggcgagcgc
ttcactgccgagacccgctcgatcatcgactacctgcagttcgcgcgcaccttcgacagc
cagttccccggcttcgatgccgatgtgcacggcctgcagcgcgacggggcgtgctatacc
gtggattgcatcaaggaataa
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