Pseudomonas alcaligenes: A0T30_14515
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Entry
A0T30_14515 CDS
T04318
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
palc
Pseudomonas alcaligenes
Pathway
palc00071
Fatty acid degradation
palc00280
Valine, leucine and isoleucine degradation
palc00310
Lysine degradation
palc00362
Benzoate degradation
palc00380
Tryptophan metabolism
palc00410
beta-Alanine metabolism
palc00640
Propanoate metabolism
palc00650
Butanoate metabolism
palc00907
Pinene, camphor and geraniol degradation
palc00930
Caprolactam degradation
palc01100
Metabolic pathways
palc01110
Biosynthesis of secondary metabolites
palc01120
Microbial metabolism in diverse environments
palc01200
Carbon metabolism
palc01212
Fatty acid metabolism
Module
palc_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A0T30_14515 (fadB)
00650 Butanoate metabolism
A0T30_14515 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A0T30_14515 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A0T30_14515 (fadB)
00310 Lysine degradation
A0T30_14515 (fadB)
00380 Tryptophan metabolism
A0T30_14515 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A0T30_14515 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A0T30_14515 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A0T30_14515 (fadB)
00930 Caprolactam degradation
A0T30_14515 (fadB)
Enzymes [BR:
palc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A0T30_14515 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A0T30_14515 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A0T30_14515 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A0T30_14515 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMR67518
LinkDB
All DBs
Position
complement(3162449..3164596)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALEGGIVELNFDLKGESVNKFNRLTLTELRQSVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLAVPTVIAINGIALGGGFE
MCLAGDYRVAAESAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAIEWIASGKENKAADAL
KVGAVDAVVAADKLQAAALDLVKRAISGELDYKAKRQPKLEKIKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KKKAKQHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGAVDIVVEAVVENPKVKQIVLAEVEGVVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKIMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMGVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVSDPAAYELLKSIVVEQRELSDEDIINFMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYAELGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagggcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgttaacaagttcaaccgtctcaccctgaccgagctg
cgtcagtccgtggatgccatcaaggccgacggttcgatcaagggcgtaatcgtcaccagc
ggcaaagacgtgttcatcgtcggcgccgacatcaccgaattcgtcgacaacttcaagctg
cccgacgaagagctggttgccggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctggccgttccgaccgttatcgccatcaacggcatcgccctgggcggcggtttcgaa
atgtgcctggccggtgactaccgtgtcgccgccgagagcgccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgtccgtctgccgcgcgtgatcggc
accgacaacgccatcgagtggattgcttccggcaaggaaaacaaggccgccgacgccctg
aaagtgggtgccgtcgatgccgtggttgccgccgacaagctccaggccgctgctctggac
ctggtcaagcgcgccatctccggcgagctggactacaaggccaagcgtcagcccaagctg
gaaaagatcaagctcaatgccatcgagcagatgatggccttcgaaaccgccaaaggtttc
gtcgctggccaggccggcccgaactacccggctccggtcgaggccatcaagaccatccag
aaagccgccaacttcggtcgcgacaaggctctggaagtcgaggccgctggcttcgtcaag
ctggccaagacctccgttgccgaaagcctgatcggtctgttcctgaatgaccaggagctg
aagaagaaggccaagcagcacgacgagatcgcccgcgacgtgaaactggccgccgtactc
ggcgccggtatcatgggtggcggtatcgcctaccagtccgcctccaaaggcactccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggtctgaacgaggcctccaagctg
ctcggcaagcgcgtcgaaaaaggccgcatgactccggccaagatggccgaagccctcaac
gccattcgcccgaccatgtcctacggtgacttcggtgccgtcgacatcgtggttgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggccgaggtggaaggcgtggtgaag
gaagatgccatcctggcttccaacacctccaccatctcgatcaacctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaggtcatccgtggcgagaagtccagcgacgtggctgttgccaccaccgtggcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttctccaagctgctgggcttcggtgtcgac
ttcgtgcgcatcgacaagatcatggagaagttcggctggcccatgggtccggcctacctg
tccgacgtggtcggcatcgacaccggccaccatggccgtgacgtgatggctgaaggcttc
ccggatcgtatgggcgttgaaggcaagaccgccgtcgacgtgatgtatgaagccaatcgc
ctgggtcagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtctccgacccggccgcctacgagctgctgaagtcgatcgtcgtcgagcagcgt
gagctgagcgacgaagacatcatcaacttcatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgaaaccgcagctgaggccgacatgggcctgatctac
ggtatcggcttccctcccttccgcggtggtgctctgcgttacatcgattccatcggtgtg
gccgagttcgtcgccctggccgacaagtacgccgagctgggcgccctgtaccacccgacc
gccaagcttcgtgaaatggccgccaagggccagaagttcttcggttaa
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