Pantoea alhagi: B1H58_16990
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Entry
B1H58_16990 CDS
T05014
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
palh
Pantoea alhagi
Brite
KEGG Orthology (KO) [BR:
palh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palh03016
]
B1H58_16990
Enzymes [BR:
palh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B1H58_16990
Transfer RNA biogenesis [BR:
palh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B1H58_16990
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
ARJ43567
UniProt:
A0A1W6B925
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All DBs
Position
complement(3569444..3571375)
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AA seq
643 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMAGDRV
IAAVQTDKDREIAEPETLVEPFLTRFVGRVQKKDDRLSIVPDHPLIKDAIPCRPVRSLQH
DFQAGDWAVAEMRRHPLKGDRGFYAELTEFITTGDDHLAPWWVTLSRHNLEREAPAETFS
DMLDEKLEREDLTALNFVTIDSASTEDMDDALYVEELADNALRLTIAIADPTAYVPAGSK
LDAIAAERAFTNYLPGFNIPMLPRELSDNVCSLRPNERRPALACRVTVGQDGSLSDIVFF
AAWVESKAKLVYDEVSDWLENKGEWQPGNEAIAQQIRLLHRVCLSRVEWRQQHALVFKDR
PDYRFLLGEKGEVLDIIAEPRRIANRIVEEAMIAANICAAMVLRDKLGFGIYNVHLGFDV
TNAEQAAAVLANHGVTADAAAMATLEGFIQLRRELDAQPTQFLDSRIRRFQSFAEISTEP
GPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIVRGESASRPNDDVTLKMGERRRLNRMA
ERDVGDWLYARFLNKAAGTDTRFSAEIIDVSRGGMRVRLLDNGAVAFIPAPFIHAVRDEL
VCSQENGTVQIKGEVVYRVTDVIEVTIAEVRMETRNIVARPAA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataatccgctgcttgcgcagcttaaagagaagctccacgcccagacaccg
cgtgtggaaggggtggtaaaaggcaccgagaaaggtttcggtttcttagaagtagacgcg
cagaaaagctactttattccgccgccgcagatgaaaaaagtgatggccggtgaccgcgtc
atcgctgcggtacaaaccgataaagatcgtgaaattgccgaaccggaaacgctggttgag
ccgttcctgacgcgctttgttggccgggtgcagaaaaaagatgaccgcctttctattgtt
cccgatcatcctctgattaaagatgccattccctgccgtccggtacgcagcctgcaacat
gactttcaggccggtgactgggccgtggcggaaatgcgccgccatccgctgaaaggcgac
cgtggcttttatgctgaactcactgaatttatcaccaccggcgacgaccatctggcaccg
tggtgggtgacactgtcacgccacaatcttgagcgtgaagccccggcggaaacgttcagc
gacatgctggatgaaaagctggagcgtgaagatttgactgcgctgaatttcgtgacgatt
gacagcgccagcaccgaagatatggatgatgcgttgtatgttgaagagctggcggataat
gcgctgcgcctgaccatcgccatcgccgatcccaccgcttatgtgcctgccggcagcaag
ctggatgctatcgccgccgagcgcgcttttactaactatctgccgggcttcaatatcccg
atgctgccgcgcgagctctccgataatgtctgctcgctgcgcccgaatgagcgtcgtccg
gcgctggcctgccgcgttaccgttggccaggacggctcgctctctgacatcgtcttcttt
gccgcctgggtcgaatctaaagccaagctggtgtatgacgaggtctccgactggctggaa
aacaaaggcgaatggcagcctggcaacgaagcgattgctcagcagattcgtttactgcat
cgtgtttgcctctcccgtgtggaatggcgtcagcaacatgcgctggtgtttaaagatcgc
cctgattaccgcttcctgctgggcgagaaaggcgaagtgctggacattattgccgaaccg
cgccgtatcgctaaccgcattgttgaagaggcgatgatcgccgctaatatctgtgcggcc
atggtgctgcgcgataagcttggctttggcatctataacgtgcatctgggctttgatgtt
actaatgccgagcaggccgctgccgtgctggctaatcacggcgtgaccgctgatgctgct
gcgatggcgacgctggaaggatttattcagctgcgacgcgagctggatgcgcagccaact
cagttccttgatagtcgtatccgtcgttttcagtcctttgccgaaatcagcaccgagcca
ggcccacactttggtcttggcctggaagcgtatgccacctggacctccccgattcgtaag
tatggcgatatggttaaccatcgtctgctgaaagcgatcgtgcgtggtgaaagcgcctca
cgcccgaatgatgacgtgacgctgaaaatgggcgagcgtcgtcgtctgaaccgcatggcg
gaacgcgatgtgggcgactggctgtatgcccgcttcctgaacaaagcggccggtaccgat
acccgcttcagcgcagaaatcattgatgtttctcgtggcggtatgcgcgtacgcctgctg
gataacggcgccgtggcctttatcccggcaccttttatccatgcggtgcgtgatgaactg
gtgtgcagccaggaaaacggcacggtacagatcaaaggcgaagtggtctatcgcgttacc
gatgtgattgaagtaaccattgctgaagttcgcatggaaacacgcaatatcgtggcgcgt
cctgctgcctga
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