Podospora anserina: PODANSg5450
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Entry
PODANSg5450 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
pan
Podospora anserina
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg5450
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PODANSg5450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
Motif
Other DBs
NCBI-GeneID:
6192511
NCBI-ProteinID:
XP_001908415
UniProt:
B2AXG4
LinkDB
All DBs
Position
7
AA seq
1079 aa
AA seq
DB search
MSSKEEQKRQRPVPKFGSFQPKPTPKPEAGPASGEARKSVRDRHGDPGGESKRGHDGRHR
ERRRDSRNRGDERRRDRERDGDRRRSGSRDGDGEKERDRHRERDRDRDRKRPKDREQHHS
SREDSVQPKTLSDNFFIDKKGDPLILRYSGNDRSKIPAYHRSGHGKILGSRGHLILHRDG
PRDLFSLSFSREGLGSAFRDKALLSQIRRAKSRRIRSSTKPPPSPTDQFISLTPPSSKKR
KRGRESPSSSDPEDQQDRKPDYRSIYGKAKPPPSDSESESSDSETSSPEQEKKELSSARK
ESVTLTRHLRSSPADIPSWLRLISLQDALFAQDVGHSRPRTSNETIALAELKLSLYQEAL
AHLPSRSGGEKEVLILGMMTTGLNIWDDKTAAKKWESLPQKYGVAPDGSFELWRARVGWE
MGRVGSCTVDRMRDVFVEKLGGLSRGLVGVEEGDERGEVCRQIVYVFLRLTKLLFEAGYT
ERAVASWQALLEMTFCRPGTATSAEGFEEFWESEVARFGEEGARGWRCFVESGGDELPPD
PRFEDKRDGVDVEDYKDPYQLWAAVETKRAAKTRMPARTLDEGVDEDPFRVVMWGDIKDF
VVWFPAGVLDTAKKLVVEAFGVFVGIPSGCEEPFVKDWRRDPFLAPKSQAFRPWERREGQ
NTESVDVVLSKRPPEFAQQGGDMATSPELLFTREGWFKCLDSWDKTHPPEETQLDLPWVL
ATLERLVTDHHREDLAEIYLATVWLNTDARTTKKVAKTLLKQYTTNTPLYNAYALLEHSN
NNPELAFKILDSATNLPNSQLLFNTQTWLHLLSSRNDLALTTLCRSVDPSVSSPPSPATL
LRARSQFSTTLDFSLSSLSLPTAAAHAESLLLLAYLSPSSPPSEPTSSSQGNISSALGAI
TDITQKFTSRSLESTPCLEKLLQTACRLSHHHSQTGPYRPALFCSTVLSHLELFPSNTIF
LELLSWAQPPLLVKDPVRELLQTIALQPGHDSLSTRRFAIMHEVHNGSAHSVKKAFESAI
TGSGKGNGEIWRGFVRFCAGRKEGKGVFYRGVEGCCLDKGLYLAAFEEGMVTDMDRSGA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaaaagaggagcagaaacggcaacgccccgtgcccaagttcggatccttccag
ccgaaacccacacccaagcccgaagcagggcccgcatcgggggaggcgcggaaatctgtc
agagaccggcacggggaccccggtggggaatccaaaagggggcatgatggccgtcaccgt
gagagacgccgtgattctcggaatcggggagatgaacgtcgtcgggatcgtgagagggac
ggagacagaagacgaagtgggagcagggatggggatggtgagaaagaacgggacaggcac
cgtgagagagaccgagatcgagacaggaaaaggcccaaagacagggagcagcaccatagc
tcaagagaggattcggtccagcccaagactctcagcgacaacttcttcattgacaaaaaa
ggcgaccctctcatccttcgctacagcggcaacgaccgctccaagatcccagcctaccac
cgctctggccatggcaaaatcctagggtcaagaggccatctcatcctccaccgtgacggc
cccagagatttattttctctctccttctcccgcgagggtctgggttcggccttcagggac
aaagccctcctctcacaaatccgacgcgccaaatctcgccggatcaggtcctccaccaaa
ccacctccctcaccaacagaccagttcatctctttgacacccccctcctccaaaaagcga
aaacgcggccgggaaagcccctcatcatcagacccggaggatcaacaggaccgaaagcca
gactacaggtctatttacggcaaggccaaacctcccccatcagactccgagtctgagtct
tcagattcggagacctcatccccagaacaagagaaaaaagagctttcttctgccagaaaa
gaatccgtcaccctcacccgccacctccgctcctcacccgccgacatcccctcctggctc
cggctgatctccctgcaagacgccctctttgcccaagacgttggccattcccgtccccgg
acaagcaatgaaaccatcgcccttgccgagttgaagttgtcgctttatcaggaagcgctt
gcccatttgccatctcgatctggtggtgaaaaggaggttctgatcctaggcatgatgacc
acggggcttaacatatgggatgacaaaaccgctgcgaaaaagtgggagagtctcccgcaa
aagtatggcgtagcaccggacgggagctttgagctgtggcgcgcgagggtgggttgggag
atggggagggtggggtcgtgtacggtggacaggatgagggatgtgtttgttgagaagctg
gggggtttgtcaagggggttggttggggtggaggagggggatgaaaggggggaggtgtgc
cggcagattgtctatgtctttttacgcctgacaaagctgttgttcgaggctgggtatacc
gagcgggcggtggcttcttggcaggcgttgttggagatgacgttttgccggcccggcacg
gcgacatcggcggaggggtttgaagagttttgggagagtgaagttgcgaggtttggggag
gagggggcgagggggtggaggtgttttgttgagagtgggggggatgagttgccgcctgat
ccaaggtttgaggacaaaagggatggggttgatgttgaggattataaagatccgtaccag
ctctgggcggctgtggaaacgaagcgggctgcgaagacgaggatgccggcgaggacgctg
gatgagggggttgatgaggatccgtttagggtggtgatgtggggggatatcaaggacttt
gtcgtctggttcccggccggggttttggacactgcgaagaaattggtggtggaggcgttt
ggggtgtttgttgggattccctccggttgtgaggaaccgtttgtgaaggactggcggcga
gatccattcttggctcccaaaagccaggctttccggccttgggagagacgcgagggacaa
aacacggagagcgtggatgttgttctgtcaaaacgcccccctgaattcgctcaacaaggc
ggtgacatggccacctcacccgagcttctcttcaccagggagggctggttcaaatgcctg
gactcctgggacaaaacccacccccctgaagaaacccaactcgacctcccatgggtgcta
gccacactcgaacgactagtcacagaccaccaccgtgaagacctagcagaaatctacctc
gccacggtctggctcaacaccgacgccagaaccaccaaaaaggttgccaaaactctgctc
aagcaatacaccaccaacacccccctctacaacgcctacgccttgctggagcactccaac
aacaacccggaactcgctttcaaaatcctcgactcagccaccaacctccccaacagccag
ctcctgttcaacacccaaacctggctccacctcctctcctcccgcaacgacctcgccctg
acgaccctctgccgctcagtcgacccctccgtctcctctcccccctccccagcaacgctc
ctcagagctcggtctcaattctccaccaccctcgacttttccctttcttccctctccctc
cccaccgccgccgcccacgcggagagtctcctcttactagcctacctctccccttcctct
cctcccagtgaaccaacctcgtcctcccaaggcaacatctcatcagccctgggtgcaatc
acagatataacccagaaattcacctcccgctctttagaatccaccccctgtttggaaaag
ctcctgcaaaccgcctgcaggctgtcacaccaccactcccagacagggccttaccgcccg
gcgcttttttgttcaactgtcctctctcacctggagctcttcccttccaacaccatcttt
ctcgaactcctatcctgggcacaaccccctttgttggtcaaggatccagtcagggagctt
ctccaaaccatcgccctccaacctggacatgactccctcagcacccggcggtttgccatc
atgcatgaagtccacaacgggagtgcccactcggttaaaaaagcttttgaatctgccatc
acggggagcgggaaagggaatggggagatctggaggggttttgttcgtttctgtgcgggc
aggaaggagggaaaaggggtgttttaccggggagtggaggggtgttgtctggataagggg
ttgtatcttgctgcttttgaggaggggatggtgacggacatggacaggtcaggagcttag
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