Planococcus antarcticus: BBH88_14300
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Entry
BBH88_14300 CDS
T04428
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pana
Planococcus antarcticus
Pathway
pana03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBH88_14300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pana03400
]
BBH88_14300
Enzymes [BR:
pana01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BBH88_14300
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BBH88_14300
DNA repair and recombination proteins [BR:
pana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBH88_14300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
ANU11381
UniProt:
A0A1C7DJD7
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All DBs
Position
1431431..1432300
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AA seq
289 aa
AA seq
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MPELPEVEGVVRQIRPVSVGKKIEAVAVSDTIRVSKTNGKEAIIKRMEADRFIESLVGAQ
IIRVERRSKYIYFTLRKDNEFLLVNHLGMSGAWFYIDQLQSIPEDKFRRHVHVVLTLSDG
KLLAFSDIRRFGEMRVLQEEADFPPLLLMAPEPFEAVALEHFLLRAESSKYKNKAIKEVI
MDGQVISGCGNIYATEALFKMKIHPKRSASRISKKRKVELFETVVAILLESIEAGGSTIS
DYRNINGESGSMQNRFGMYGKKQCADCGTATKTLKIGGRASMYCPSCQK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttccggaagtggaaggtgtcgttcgacagatccgccccgtgtccgttgga
aaaaagattgaggcagtagcggtttcagatacgatccgcgtgtcgaaaacaaatggcaag
gaagcgatcatcaaacggatggaagctgaccggtttatcgaaagcttggtcggtgcacaa
atcatccgtgtcgagcggcgcagtaaatacatttattttacattgcgaaaagacaatgaa
ttcttattggtcaatcatttagggatgtctggagcttggttttatatcgaccagcttcag
tcgattccagaggacaaattccgacgccacgtacatgtcgtattgacattgagcgatggt
aagctattggcattttctgatatccgaagattcggggagatgcgggttttgcaggaagaa
gcggatttcccgcctttgctgctgatggcaccagagcctttcgaggcagtggcacttgaa
cattttctattgagggcggaaagttccaaatacaagaacaaggcaatcaaagaagtcatt
atggatggccaagtcatttctggctgtggcaatatttatgcaaccgaagcactttttaaa
atgaagattcatccaaagcggtcggctagccgcatcagtaaaaagcgcaaagtggaatta
ttcgagacggtcgttgccattcttctggaaagcatagaagcaggaggcagtacgatatcg
gattaccgcaatattaacggtgaatcgggtagcatgcaaaaccgtttcggcatgtatgga
aaaaaacaatgtgcagattgcggcactgcaacaaaaaccctgaaaatcggcggaagggct
tcaatgtattgcccgagctgccagaaatga
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