Pantoea sp. PSNIH2: PSNIH2_11045
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Entry
PSNIH2_11045 CDS
T03514
Name
(GenBank) ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
panp03009
]
PSNIH2_11045
Ribosome biogenesis [BR:
panp03009
]
Prokaryotic type
ribosomal protein modification factors
PSNIH2_11045
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Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AIX74259
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Position
2387060..2388817
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AA seq
585 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLQDLGFNIEEASWLNPVPNVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGESIANGDFVHYPNEKWFPLPENDTLPEG
ILDPGLRAFYDPENELSASGLIDLQSGNAARGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTPNEARVQGLSEVFERYVKNRIIAEAISLPAIPQDVLARYPGVVEAIVRLEAE
GFPIFAFDASLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGAISWDLFKEQADYPFVDWRFDGSTEEEFATLM
DIFKAEGKEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNNMGADLRETLLALPDS
QWDKEDYLALIEQLDEEGHDDFTRVRELLGLATGKDNGWYTLRIGELKAMLALAGGDLDQ
ALIWTEWTMEFNSSVFTTERANYYRCLQTLLLLTQEEERDPQQYYSAFVRMYGADAVEAA
SAALSGEAPFYGLQPVDNELQAFPAHQALLAAYEKLQRAKRNYWK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacctttattccaggcaaagatgccgctctggaagattccatcgctcgcttt
cagcaaaaattacaggatctgggctttaatattgaagaagcgtcctggctgaacccggtg
cctaacgtctggtcggtgcatattcgcgaccgcgattgcccgctttgttttactaacggt
aaaggcgccagcaagaaagctgcgttagcctctgcgttgggcgaatattttgaacgtctc
tcgaccaactatttttttgcggacttctggttgggcgagtcgattgccaacggcgatttt
gtccactatcccaatgaaaaatggtttccgttgccggagaatgacactctgccagaaggc
attctcgaccctggtctgcgcgcgttttacgacccggaaaacgagctgagcgccagcgga
cttatcgatctgcagtccggcaatgcggcgcgcggcatttgcgcgctgccctttacgcgt
cagtctgaccaacagaccgtttatattccgatgaatattatcggcaacctgtacgtctct
aacggcatgtccgcaggcaataccccgaatgaagcgcgcgtgcaggggctttcagaagtt
ttcgagcgctacgtaaaaaatcgcatcatcgctgaagctatcagcctgcctgcgattccg
caggacgttctggcgcgttatccaggcgtggtggaagccattgtgcgccttgaagcggaa
ggtttcccgattttcgcttttgacgcttcgctgggcgggaaataccctgtgatttgcgtg
gttctgtttaacccggcaaacggcacctgtttcgcttcgtttggcgcgcatcctgatttc
ggcgtggcgctggagcgcaccgttactgagctgctgcagggccgcggcctaaaagattta
gacgtcttcacgccgccgacctttgacgatgaagaagttgccgaacatgccaacctggaa
acgcacttcattgactccagcggcgccatttcatgggatctgtttaaagaacaggcggat
tatccgtttgtcgactggcgcttcgatggcagcacagaagaagagttcgcgacgctgatg
gacatcttcaaggcggaaggcaaagaggtttatatcgcggattacgagcatctggatgtc
tacgcctgccgtattatcgtgcccggcatgtccgatatctatccggcggaagatctgctg
ctggcgaataacaatatgggagccgatctgcgcgaaacgctgttggcgctgccagacagc
cagtgggataaagaggattatctggccctgattgagcagctggatgaagaaggccacgat
gactttacgcgcgtgcgcgaactgctgggcctggcgaccggtaaagataatggttggtac
actttgcgcatcggcgagctgaaagcgatgctggctctggcgggcggcgatctggatcag
gcgctgatctggaccgaatggacgatggaattcaacagctcggtctttaccaccgagcgt
gcgaattactatcgctgcctgcagacgctattgctgctgacgcaggaggaggaacgtgat
ccgcagcaatactactctgcgtttgtacgcatgtacggcgctgacgcggttgaagcggcc
tcggcagcgttaagcggcgaagcgcctttctacggcttgcagccggttgataatgaatta
caggccttccctgcgcatcaggctctgctggccgcttatgaaaagcttcagcgcgctaaa
cgtaattactggaaataa
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