Pantoea sp. PSNIH1: PSNIH1_08585
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Entry
PSNIH1_08585 CDS
T03464
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pant
Pantoea sp. PSNIH1
Pathway
pant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSNIH1_08585 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pant03019
]
PSNIH1_08585 (pcnB)
Enzymes [BR:
pant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PSNIH1_08585 (pcnB)
Messenger RNA biogenesis [BR:
pant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSNIH1_08585 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AIX52140
LinkDB
All DBs
Position
complement(1798014..1799351)
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AA seq
445 aa
AA seq
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MTIIPRENHNISRKDISENALKVLYRLNKAGFEAYLVGGGVRDLLLGKKPKDFDVTTNAT
PEQMRKLFRNCRLVGRRFRLAHVMFGPEVIEVATFRGHHQEESEDDRNSSQRGQNGMLLR
DNIFGSIEDDAQRRDLTINSLYYSVADFTVRDYVGGLQDLQEGVVRLIGDPETRYREDPV
RMLRVVRFAAKLNMQIAPETAEPIPRLATLLNDVPPARLFEEALKLLQAGYGYRTWQMLC
EYQLFQPLFPTLARHFTEQGDSMMERMLAQVLKNTDTRLHNDLRVNPAFLFAAMFWYPQL
ESAERIAQESGLTYYDAFALSMNDTLDEACRALAIPKRITTLVRDIWQLQLRMSRRHGKR
AWKLMEHPKFRAAYDLLALRAEVEKNPELQRLSQWWGEFQAAVPVQQKTMLNTLGDDPQP
RRKPRRPRRRSTGPRREQGSSSNAS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcattccccgggaaaaccataacatctcacgcaaagatatcagcgaaaacgcc
cttaaggtgctctatcgcctgaataaagcaggctttgaagcttacctggtcggcggcggc
gtacgcgacctgctactgggcaaaaagccgaaagatttcgacgtgacgaccaatgccacg
cctgagcagatgcgcaaactgttccgcaactgccgtctggttggccgccgtttccgtctg
gcgcacgtgatgtttgggccggaagtgatcgaggtggcgactttccgcggccaccatcag
gaagagagcgaagacgatcgcaacagctcgcagcgcggccagaacggcatgctgctgcgc
gacaatatttttggcagcatcgaagatgatgcgcagcgccgcgatctcaccatcaacagc
ctctactacagcgtggcagacttcacggtccgcgactatgtgggtggcctgcaggatctg
caggagggcgtggtacgcctgattggcgatccggagacgcgctaccgtgaagatccggta
cgcatgctgcgcgtggtgcgctttgccgccaaactcaatatgcagattgcgccggaaacc
gccgagccgatcccgcgcctggcgacgctgctgaatgacgttccgcccgcccgcctgttt
gaagaggcgctgaagctgctgcaggctggctatggctaccgcacctggcagatgctgtgt
gaatatcagctcttccagccgctgttcccgaccctggcgcgccactttaccgagcaaggc
gacagcatgatggaacgcatgctggcgcaggtgctgaaaaacaccgatacccggctgcac
aacgatttgcgtgtcaatccggcgtttctgtttgccgcaatgttctggtatccgcagctg
gaatccgctgagcgtatcgctcaggagagcggcctgacctactatgacgcgtttgcactc
tccatgaatgatacgctggacgaggcgtgccgcgcgctggcgatcccgaaacgcattacc
accctggtccgcgatatctggcagctgcagctgcgtatgtcgcgtcgccacggcaaacgc
gcatggaagctgatggagcatccgaaattccgcgccgcttacgacctgctggcgctgcgt
gctgaagtagaaaagaatccggaactgcagcgtctcagccagtggtggggtgaattccag
gccgccgttccggtccagcagaaaaccatgctgaacacgctgggggacgatccgcagccg
cgccgtaaaccgcgccgtccgcgccgccgctccaccggtccgcgtcgcgaacagggcagc
agcagcaacgcatcatga
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