Paraglaciecola sp. T6c: Patl_1916
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Entry
Patl_1916 CDS
T00372
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat00071
Fatty acid degradation
pat00362
Benzoate degradation
pat00650
Butanoate metabolism
pat01100
Metabolic pathways
pat01120
Microbial metabolism in diverse environments
pat01200
Carbon metabolism
pat01212
Fatty acid metabolism
Module
pat_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Patl_1916
09103 Lipid metabolism
00071 Fatty acid degradation
Patl_1916
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Patl_1916
Enzymes [BR:
pat01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Patl_1916
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
F420_oxidored
ApbA
UDPG_MGDP_dh_N
ATP-grasp_2
2-Hacid_dh_C
DAO
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
ABG40434
UniProt:
A0A9J9B9Q2
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All DBs
Position
2319872..2321980
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AA seq
702 aa
AA seq
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MSQAVIAEVQGNVAVLYMQSPPVNALSKSVRVGLIENINQALDNDQVEAIVISSKLALFS
GGADISEFSGGNLEPHLPTVLDVIENASKPVIAVLNGPAFGGGLEVALSCHYRVTFASNK
VGLPEVNLGILPGAGGTQRLPRLAGVAKALDMIVSGRPEKASKLAGVFDLIVEDPTNLLS
EAMAFVQKVVAEGAKVRKTSDVAIDKASAPDELFAQYRQGLKKQARGFFAPERCIQAVEA
SVSLPFEQGLVRESELFMECMGSKEARAQQHFFFAERAAAHVSDYDKSTPTRDIKKVGII
GAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYENSAKKGKLTQQAVEDRMA
LLQGSTEYEALSDVDLVIEAVFEKMSVKKEVFGALDKVCKKGAILASNTSTLDVNEIAAS
TSRPEDVIGLHFFSPANVMKLLEVVKAEKTSADVIKTCMQMAKKINKVAVLVGVCFGFVG
NRMIEPYGREAARLMLEGATPQQIDKVIYDFGLPMGPFTMGDMAGLDIGFYVRESRREFI
AHDPSYCVVSDRLVKQGRVGLKSGRGAYMYEPGNRMPIPDPEVVEMAKEEAARLGIAQRD
ISDQEILERIIFPLINEGALILEEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEIGLK
KVYDAMCKYRDELGEYGGHWFEPAPLLKQLAEQGKRFADFKQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagcagtgatagctgaagtacaaggaaatgtcgcggttttgtatatgcagagc
ccaccggttaatgcgttatctaagtcagttcgtgttggcttaattgaaaacattaaccaa
gcgctggacaacgatcaggtcgaagcaattgtaatctcatctaagttagcattgttctct
ggcggtgctgatatcagtgaattttctggcggtaatttagagccgcatctacctaccgtt
ttagatgttatcgaaaatgcaagtaagccagttattgccgtactcaatggccctgctttt
ggtggtggtctagaagtggcgctttcatgtcattatcgcgttacgtttgccagtaacaag
gttggcttgccagaagtgaatttaggtatattacctggcgcgggcggtactcagcgcctt
cctcgtttggcaggcgtggcaaaagcactcgatatgatagtgtcgggacgcccagaaaaa
gccagcaagttagcaggtgtatttgacttaatagttgaagacccaacaaacttactcagt
gaagcaatggcatttgtccaaaaagtggttgctgagggtgcgaaggtgcgcaaaacctct
gatgtggctattgataaagctagcgcgcctgatgagctatttgctcaatatcgtcaaggc
cttaaaaagcaagctcgcggattttttgcccctgagcgttgtatccaagctgttgaagca
tctgtttcgttgccatttgagcaaggcttggtgcgtgaaagtgaattgttcatggaatgc
atgggctcgaaagaagctcgcgcacagcagcactttttctttgcagagcgcgcggctgct
cacgtgagcgattacgacaaatccacacctacccgagatatcaaaaaggtcggcattatt
ggcgcaggcaccatgggcggcgggatcgctatgaacttcgccaatgctggtataccggtc
atcatgcttgaacttaagcaagaggcattggacaagggccttgcgcttattcgtaagaac
tacgaaaactccgctaagaaaggcaagcttacccaacaagctgttgaagatcgcatggcg
ttattgcaaggttcaactgaatacgaagcactaagcgacgtagatttagttattgaagcc
gttttcgaaaagatgtcagtcaaaaaagaagtatttggtgcactggataaagtatgtaag
aaaggcgccatactcgcttcaaacacctctactttagatgtcaacgaaattgcggcgtct
acatcacgtcctgaagatgtgattggtttgcacttctttagcccagctaacgtgatgaaa
ctgcttgaagtcgtcaaagctgaaaaaacctctgcagacgttatcaaaacctgtatgcag
atggcgaagaaaatcaataaagtcgctgtgctggttggtgtttgtttcggctttgtgggt
aaccgcatgatcgaaccgtacggccgtgaagccgctcgcttaatgcttgaaggggctacg
ccgcagcaaatcgacaaagtgatttacgattttggtttgcctatgggcccattcaccatg
ggagacatggcaggcttagacatcggtttttacgtacgcgaatcacgacgtgaatttatt
gcccatgatccgagttactgtgtggtatctgaccgcttagtgaaacaaggtcgtgtcggt
cttaaatctggtcgcggtgcttatatgtatgagccgggtaacagaatgccgatccctgac
cctgaagtggttgaaatggcaaaagaagaggccgcacgtttaggcattgcccaacgtgac
atctcagaccaagaaattctagagcgcattatctttcctttgattaacgaaggtgcattg
attttggaagaaggtattgccgctaaatcaagcgatatcgatgttatttatgtttatggt
tacggcttcccggtttaccgcggcggtcctatgcaatacgcagatgaaattggcttgaaa
aaagtttatgacgcgatgtgtaaatatcgcgatgaattaggtgagtacggcggccactgg
tttgaaccagctccgttgttgaaacaactggctgagcagggcaaacgctttgcagatttc
aaacagtaa
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