Pectobacterium atrosepticum 21A: GZ59_14800
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Entry
GZ59_14800 CDS
T03293
Symbol
rfbC
Name
(GenBank) dTDP-6-deoxy-D-glucose-3,5 epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pato
Pectobacterium atrosepticum 21A
Pathway
pato00521
Streptomycin biosynthesis
pato00523
Polyketide sugar unit biosynthesis
pato00541
O-Antigen nucleotide sugar biosynthesis
pato01100
Metabolic pathways
pato01110
Biosynthesis of secondary metabolites
pato01250
Biosynthesis of nucleotide sugars
Module
pato_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pato00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GZ59_14800 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GZ59_14800 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GZ59_14800 (rfbC)
Enzymes [BR:
pato01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GZ59_14800 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AIK13314
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Position
complement(1616693..1617229)
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AA seq
178 aa
AA seq
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MQIIDTAVHGAKIIQPKVFGDARGFFLETFEKRRYQEMLDIDVDFVQDNHSRSSKGVLRG
LHFQKTNPQGKLVRVVRGEVFDVAVDIRQDSPTYGKWYGALLSEENKTQFWLPPGLAHGF
VVLSDIADFEYKCTDYYDPSDEGCLLWNDPDLGIEWPISTPQLSEKDKVGKLFKDLAK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcattgatactgctgttcacggcgcaaaaatcattcagccgaaagtattcggt
gatgcgcgaggtttttttctggaaacgtttgaaaagagacgttatcaggagatgctggat
atcgatgtagactttgtccaggataatcattcccgctcaagtaaaggtgtattacgaggt
ctgcatttccagaaaacaaacccgcaggggaaacttgtccgcgttgtacgtggcgaggtt
tttgacgttgcagtagatattcgtcaagattctcctacctacgggaaatggtatggagca
ctcctctctgaagagaacaaaacgcaattttggctccctccggggctagcacatggtttt
gttgtcctctcagatatcgcagattttgagtacaagtgtacggattattatgaccctagc
gatgagggttgcctattatggaacgatcctgatcttggtatcgaatggccaatatcaacc
ccgcagttatccgagaaagacaaagtaggcaagttattcaaggatctagcaaaatga
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