Pectobacterium atrosepticum JG10-08: EV46_22115
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Entry
EV46_22115 CDS
T03199
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
patr
Pectobacterium atrosepticum JG10-08
Brite
KEGG Orthology (KO) [BR:
patr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
patr03032
]
EV46_22115 (gyrB)
03400 DNA repair and recombination proteins [BR:
patr03400
]
EV46_22115 (gyrB)
Enzymes [BR:
patr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EV46_22115 (gyrB)
DNA replication proteins [BR:
patr03032
]
Prokaryotic type
DNA Topoisomerases
EV46_22115 (gyrB)
DNA repair and recombination proteins [BR:
patr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EV46_22115 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AIA73196
LinkDB
All DBs
Position
complement(4920353..4922770)
Genome browser
AA seq
805 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDII
ITIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLKLVIHREGKLHEQTYKHGVAQAPLAVTGETDRTGTTVRFWPSHETFSNVL
EFEYEILAKRLRELSFLNSGVSIRLIDDREKDKADHYHYDGGIKAFVDYLNRNKTPIHPN
VFYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNTYMDK
EGYSKKSKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVESLVNEKLVD
YLMENPSDAKIVVGKIIDAARAREAARKARDMTRRKGALDLAGLPGKLADCQERDPALSE
LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQLPEIVERGHVYIAQPPLYKVKK
GKQEQYIKDDEAMDQYQIMLALDGATLHTNAQAPALAGEPLEKLVSEHYAVQKLIGRMER
RFPRPLLNRLIYQPTLSEADLSEREKVQAWAESLISGLNANEVHGSTYSFVVHHDEERSV
FEPALRVRTHGVDTDYPLGAGFVAGGEYRKLNLLGEKLRGLIEEDAFIERGERRQPVASF
EQALEWLVKESRRGLTVQRYKGLGEMNPDQLWETTMDPTSRRMLRVTVKDAIAADELFTT
LMGDAVEPRRAFIEENALKAMNIDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtatcaaggtattgaaagggctggatgcggtacgt
aaacgcccaggtatgtatatcggcgatacggacgatggtaccggcctgcatcacatggta
tttgaggttgtggacaacgctatcgacgaagcactcgctggctattgtaaagacattatc
atcactatccatgccgataactcggtatcggtgcaggatgatggccgtggtattccaacc
ggcattcatgaagaagaagggatctctgcggctgaagtcatcatgactgtgctgcatgcg
ggcggtaagttcgacgataactcgtataaagtctccggcggcctgcacggcgtaggggtt
tctgtggttaacgccctgtcggaaaaactgaagctggttatccaccgtgaagggaaactt
cacgagcagacctataagcacggcgtggcgcaggcaccgctggcggtcacgggtgaaacc
gacagaacgggtacgacggtgcgtttctggccgagccacgagacgttcagcaatgtgctg
gaattcgagtatgagatcctggccaagcgtctgcgtgagctatcgttcctgaactccggc
gtctctattcgcctgattgacgatcgtgagaaagataaagccgatcattaccattatgat
ggcggtatcaaggcattcgttgactacctgaaccgtaacaagacgccaatccacccgaac
gtgttttatttctcgacgatgaaagatgacatcggcgtggaagtggcgttgcagtggaac
gatggtttccaggaaaacatttactgctttaccaacaatattccgcagcgtgacggtggt
acacacttggccggttttcgtgccgcgatgacccgtacgctgaatacttacatggataaa
gaaggctacagtaagaaatccaaaatcagcgcgaccggtgatgatgcgcgtgaagggctg
attgctgtggtgtctgtgaaagtgccggatccgaagttctcctcgcagaccaaagacaag
ctggtttcttccgaagtgaaaaccgcggtcgaatcactggtgaacgaaaagctggtggat
tacctgatggagaacccgtcagacgccaaaatcgtggtcggtaaaattattgatgccgca
cgtgcccgtgaagcggcgcgtaaagcacgtgatatgacacgtcgtaaaggcgcgctcgat
ctggctggcctgccgggcaaactggcagactgtcaggaacgcgaccctgctctgtctgaa
ctgtacctggtggaaggggactcagcgggcggctctgctaagcagggacgtaaccgtaag
aaccaggcgattctgccgctgaagggtaaaatcctgaacgttgagaaggctcgttttgac
aagatgctttcctcgcaggaagtggcgacgctgatcaccgcgctgggctgcggcattggc
cgtgatgaatacaacccggacaaactgcgctatcacagcatcattatcatgaccgatgcc
gacgtcgatggttcgcacattcgtaccctgctgttgaccttcttctatcgtcaattgcct
gaaattgttgagcgtggccacgtttatatcgcgcagccgccgctgtacaaagtgaaaaag
ggcaagcaggaacagtacatcaaagatgacgaagcgatggatcagtaccagattatgcta
gcactggacggcgcgacgttacacaccaatgcacaggcacctgcgctggcgggtgaaccg
ctggagaaactggtttctgaacattacgccgtgcagaagctgattggccgtatggagcgt
cgcttcccgcgtccgttgctaaatcgtctgatctatcagcctacgctgtctgaagctgat
ttgagcgagcgcgaaaaagtgcaggcgtgggcggaatcgctgattagcggcctgaacgca
aacgaagtgcatggcagcacgtacagctttgtggttcaccacgatgaagagcgtagcgtg
tttgaaccggcactgcgcgtgcgtacgcacggtgtggataccgattatccgctgggcgcg
ggcttcgttgcgggtggcgaatatcgcaagttgaatctgctgggcgaaaaactgcgtggc
ttgattgaagaagatgcattcatcgaacgtggtgagcgtcgtcagccagtggccagcttt
gaacaggcgctggaatggttggtgaaagagtcccgccgtggtcttactgtgcagcgttat
aaaggtctgggtgaaatgaacccggatcagctgtgggaaaccacgatggatccaaccagc
cgccgcatgctgcgtgtgacagtgaaagacgccattgctgccgatgagctgtttacgacc
ctgatgggtgatgcagttgaaccgcgtcgtgcgtttatcgaagagaacgccctgaaggcg
atgaacatcgatatctga
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