Prunus avium (sweet cherry): 110762071
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Entry
110762071 CDS
T05161
Name
(RefSeq) THO complex subunit 4A isoform X1
KO
K12881
THO complex subunit 4
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03013
Nucleocytoplasmic transport
pavi03015
mRNA surveillance pathway
pavi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110762071
09122 Translation
03013 Nucleocytoplasmic transport
110762071
03015 mRNA surveillance pathway
110762071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pavi03019
]
110762071
03041 Spliceosome [BR:
pavi03041
]
110762071
Messenger RNA biogenesis [BR:
pavi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110762071
TREX complex
110762071
Spliceosome [BR:
pavi03041
]
Complex C
Other components
EJC/TREX
110762071
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110762071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
110762071
NCBI-ProteinID:
XP_021820358
UniProt:
A0A6P5T1Y9
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MQDPLNMSLDDLIKTSKKSGSGNARGRGRASGPGPARRLPNRAANRTTPYAAAKAPETAW
QHDLYADQGAAAFPPQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGVHY
DRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGGPPTLPPAAN
GNFGNSNGVPRGSGQSRGGAFGRIRGGGGRGPRRGGRGRGSGNGGGRGRGGEKVSAEDLD
AELEKYHAEAMQE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaccctctaaacatgtccctcgacgacctcatcaagaccagcaagaaatccgga
tcgggcaacgctcgaggccgtggccgggcctcaggacccggacccgcccgccggttgccc
aatcgggccgccaatcgtacgacgccgtatgcggcggccaaggcgccggagaccgcgtgg
caacacgacctgtatgcggatcagggggcggcggcgttcccgcctcaagctggaagagcc
tcggccattgaaactggaaccaagctctacatctccaatctcgattatggcgtttccaac
gaggacattaaggaactgttttctgaggttggtgacctgaagcgatatggagtacattac
gaccgaagtgggagatcgaagggaacggcagaagtagtcttctcacgacgaccagatgct
gtggccgcggttaaaagatacaacaatgttcagcttgatgggaaaccaatgaagatagag
attgtaggaacgaacatttcgacacctggcggacctcctactttgcctcctgctgctaat
ggcaactttggaaattcgaatggagttcctaggggcagtggacagagtaggggtggtgca
tttggacgtatacgtggcgggggtggccgtggtcctagaagggggggccgtggacgtgga
agtggtaatggaggtggaagaggccgtggtggtgaaaaggtatctgctgaagatcttgat
gctgagctggagaagtaccatgcagaagcaatgcaagagtaa
DBGET
integrated database retrieval system
