Photorhabdus asymbiotica: PAU_03158
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Entry
PAU_03158 CDS
T00941
Symbol
holA
Name
(GenBank) dna-directed dna polymerase iii delta chain
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pay
Photorhabdus asymbiotica
Pathway
pay03030
DNA replication
pay03430
Mismatch repair
pay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAU_03158 (holA)
03430 Mismatch repair
PAU_03158 (holA)
03440 Homologous recombination
PAU_03158 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pay03032
]
PAU_03158 (holA)
03400 DNA repair and recombination proteins [BR:
pay03400
]
PAU_03158 (holA)
Enzymes [BR:
pay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PAU_03158 (holA)
DNA replication proteins [BR:
pay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PAU_03158 (holA)
DNA repair and recombination proteins [BR:
pay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PAU_03158 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DUF4388
Motif
Other DBs
NCBI-ProteinID:
CAQ85246
UniProt:
C7BH80
LinkDB
All DBs
Position
3720048..3721088
Genome browser
AA seq
346 aa
AA seq
DB search
MIKLYPEQLISQLNEGLRNCYLIWGNDPLLLQESQDHIRRAAEQHSFTEHFTYTLDNHTE
WNEIFSICQSLSLFASRQTLTLLLPENGLNTVMAAQLVKLEGLLHSDMLLILRGLKLTKA
QENSNWFKTLGKNGVYISCQTPELNRLPQWVAQRAKTMKLTLEEPANQLLCYCYEGNLLA
LTQALERLSLLYPDGKLTLHRVENAVNDAAHFTPYHWVDSLLLGKAKRAWHILKQLKQED
CESVILLRTVQRELQLLLTLKRQSPTIPMKTLLDQHRVWQNRRALLTSALQRLTQHDLQR
AIHLLVQIELRVKQDYGQSVWPDLETLSMLLCGKTPPESFFNASYH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaactctatcccgaacaactgatttcgcagctcaatgaagggttgcgaaactgt
tatctaatatggggcaatgaccccctgttattacaggaaagtcaagatcatatccgcaga
gccgctgaacagcactctttcacggaacacttcacttacaccttggataatcataccgaa
tggaatgaaatattcagtatttgccagtcattaagcctatttgccagccgtcaaacactc
actttactgctgccggaaaatggccttaacacagtcatggctgcacaattggtaaaactg
gagggattgcttcactccgatatgctactgatattacgcggtttaaaattaaccaaagca
caagagaacagtaactggtttaaaacattaggaaaaaacggggtttacatcagttgtcag
acacccgaactgaaccgtctgcctcaatgggtcgcacaacgggccaaaaccatgaaactg
actctagaagaaccagccaatcaattactgtgctactgttatgaaggaaacttactagcc
ctaacccaggcacttgagcggctctctctattatacccagatggtaaactgactttacat
cgtgttgaaaatgccgtaaatgacgcggctcacttcacaccttatcactgggtagactcg
ctattattaggaaaggcaaaacgagcctggcacattctgaaacagttaaaacaggaggat
tgtgagtctgttattctgctgcgtactgtacaacgtgaactacaactgttactgacatta
aagcgtcaaagccccacaatccccatgaaaactctgttagatcagcatcgggtatggcaa
aaccgtcgagcattactgacaagtgcactacaacgtctcactcaacatgatttgcagcga
gcaattcatttacttgtacagatagagctccgagttaaacaggattacggccagtccgtc
tggccagatttagaaacactttccatgttgttatgtggaaaaacaccacctgagagcttt
tttaatgcctcataccattaa
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