Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a2592
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Entry
PSEBR_a2592 CDS
T01472
Name
(GenBank) putative Transcription factor, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a2592
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSEBR_a2592
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
MarR_2
HTH_20
HTH_30
HTH_11
HTH_50
HTH_Tnp_ISL3
HTH_34
HTH_5
HTH_24
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AEA68882
UniProt:
F2KFY6
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Position
complement(3216326..3217240)
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AA seq
304 aa
AA seq
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MIANLPPLNAVRAFAAAARHQSFSRAAEELHVSHSAVSRHVKLLEERLGVLLFERRTRQS
LLTPAGRAFYEQVSEALTQIANAATALTRNAAQRKVTINVRPSFAVRWLIPRLPDFMALH
PDIKPDIVTSTLPPDPSRETFDVVIRRGHAGWSPHVQPTVLLEDDLLLVAAPSLLHSVPL
ETIHDLARHTLLSGRTRSSDWQDWMEHAGIEPLNNLPTLQFDHMHLVLQAAVDGLGVALC
PASLLGRDLSNGRLTCPLPSLRLPLARYYYGVSGDAVAETQVFVDWLFSQVQQDWDGQGP
VKSS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccaacctccccccgttgaacgccgtccgcgccttcgccgctgccgctcgccac
cagagtttcagccgcgccgccgaagaactgcacgtgagccacagtgccgtcagccgccac
gtaaagttgctcgaagagcgcttgggcgtgctgctgttcgaacgtcgaacccgccagtcc
ttgctcacaccggccggccgggctttctacgaacaggtcagcgaggccctgacccagatc
gccaacgccgccaccgcactgacgcgcaacgctgcccagcgcaaagtgaccatcaacgta
cgcccctccttcgcggtgcgttggctgatcccgcgactgcccgacttcatggcgcttcac
ccggacatcaagcccgacatcgtcaccagcaccctacctcccgatccatcacgggaaacg
ttcgacgtggtcatccgccgcgggcacgccggctggtcgccccatgtacagcccacggtg
ctgctggaagacgacctgctgctggtcgccgccccgtcgttgctgcacagcgtgccattg
gaaaccatccacgacctggcccgacacaccttgttgtcgggcaggacgcgcagcagcgat
tggcaagactggatggagcacgcagggatcgagccattgaacaacctgccgaccctgcaa
ttcgatcacatgcacctcgtgctgcaggccgccgtcgatgggctgggcgtggcgctatgt
ccggcttcgctgctgggcagggatttgtccaacgggcgcctgacctgtccactgccgtcg
ttgcgcctgccgttagcccgctattactacggggtgtccggggatgcggtggctgagacg
caggtttttgttgattggttgttttctcaggtccagcaggattgggatggacagggtcca
gtaaagagctcgtag
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