Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4961
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Entry
PSEBR_a4961 CDS
T01472
Name
(GenBank) conserved hypothetical protein; putative lipoprotein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
PSEBR_a4961
Enzymes [BR:
pba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSEBR_a4961
Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSEBR_a4961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AEA71385
UniProt:
F2K5U6
LinkDB
All DBs
Position
complement(6001859..6002884)
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AA seq
341 aa
AA seq
DB search
MRALPTYQPLKTKPLKLVALAALSLLVVSCSTSRTPAQKDSTAARATPGLDINRAHKDGA
PWWDVDVSRIPDATPTLHTGPYKANPYTVLGKTYFPLSDSKRYVASGTASWYGTKFHGQN
TANGEVYDLYGMSAAHKTLPLPSYVRVTNLDNNKSVILRVNDRGPFYSDRIIDLSYAAAK
KLGYAEIGTARVKVEGIDPQEWWAQRGRPAPLMLNEPKVAQNAAPTVTASTGTVEQWTPP
PQQHAAAVVPVQLDAKKNASATASGQFLQVGAFANPDAAELLRSKLSSMVSAPVFISSIV
RNQQTLHRVRLGPIGSPGEVQQVQNSVRLANLGSPSLVTAE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcactgcctacctatcaacccctgaaaaccaagcccctcaagctcgtggcgttg
gccgcgctgtcgctgttggtcgtcagttgttcgaccagccgcacgccggcccagaaagac
tccaccgccgcgcgcgcgacgccgggcctggacatcaaccgggcccacaaggacggcgcg
ccgtggtgggacgtggatgtctcgcgcattcccgacgcgacgccgaccctgcacaccggc
ccctacaaggccaacccgtacacggtattgggcaagacctatttcccgctgagcgactcc
aagcgctatgtcgcttcgggcacggcgtcctggtacggcaccaagttccatggccagaac
accgccaacggcgaagtgtatgacctgtatggcatgagcgcggcccacaagaccttgccg
ctgcccagctatgtgcgggtgaccaacctggacaacaacaagagcgtgatcctgcgggtc
aatgaccgtgggccgttctattccgaccgcatcatcgacttgtcgtatgcggcggcgaaa
aaacttggttacgctgaaatcggcaccgcccgggtcaaggtcgaaggtatcgacccgcag
gaatggtgggcccaacgcggccgtccggcgcctttgatgctcaacgagccgaaagtggcg
caaaatgccgcgccgaccgtgacggcgtccaccggcacggtcgagcagtggacgccaccg
ccgcagcagcacgcggcggccgtagtgcccgttcagctcgacgcaaaaaaaaacgcttct
gcaacagcgtctggccagtttctgcaagtgggcgcgttcgccaacccggacgctgccgag
ctgctgaggtcgaagctcagctcgatggtgagcgccccggtgttcatcagctcgatcgtg
cgcaaccagcagacactgcatcgagttcgcctggggccgatcggttctccgggtgaagtc
cagcaagtacagaacagtgtgcgcctggccaatctcggttcgccgagcctggtcaccgcc
gagtaa
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