Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5054
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Entry
PSEBR_a5054 CDS
T01472
Name
(GenBank) putative transport-related membrane protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a5054
Transporters [BR:
pba02000
]
Other transporters
Pores ion channels [TC:
1
]
PSEBR_a5054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AEA71486
UniProt:
F2KLU3
LinkDB
All DBs
Position
complement(6108215..6110302)
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AA seq
695 aa
AA seq
DB search
MSRLSTVLLLFLLAMTGTSAYGTAAVPGTSQPSETPAEPAPLVQGGLLGAISSSIDDVQD
KLDLNQSLVEAWRLRADRAADEVDRLVDQTSRLSWRVAGDFLLLSSVWIGAFALIWSGAR
LLLRHLGRRRWLRTHQRVRDLLGYLLPYTAAALICLPLTLYVSHFLQVSVGRALALCFAY
ATSSGIFSTSVLLCVIVMFNAGHKRRAVAMIRRFSPRPLFMIGFLAALSDALTSPQIARQ
LGGNITSSIAVFTGLFASVIFGWLVIRMRRPVAHLIRNRPLAQRLKQPALQESLRIFSGL
WYWPILLMVLVSAVSLIGVGEDNQKALRCALFTTILLIATVFLSTVFQHVFKSPKAEAIQ
RDSAYKGRLLSLLHALLRIVMAVVFIEVLGRIWGISLFEFASRNAIGRAISDSLSRIGLI
FLMTWLTWVVLDTAIQEALKPPLNKRGARQPSTRVKTILPLLRNAAKIILVVICAITTMA
NLGINVAPLLAGAGVVGLAIGFGSQQLVQDVITGLFIIIEDTLSIGDWVVLSSGHAGTVE
GLTIRTLRLRDGKGFVHSVPFGQIKAVTNQSRQFAFAFFSVQFTYDTDVDQAIELIREAG
RSIAEDPFLKFNLQGPLDVFGVDKMDLNGVVLTAQFRTVSGGQYAVSRAFNQQLKKLVDN
HPAVHFAQTYPQQVVLPKRLVEEQKAGDELPDQAQ
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
ttgtctcgattgagcactgtattgctgctgttcctgctggcgatgaccggcaccagcgcc
tacgggaccgccgctgtccccggcacctcccagcccagtgaaacgcccgccgaacccgcg
ccgctggtgcagggcggtttattgggggccatcagttcgagcatcgatgacgtccaggac
aagctcgatctcaaccagagcctggtggaggcctggcgcctgcgggcggaccgggcggcg
gatgaggtggaccggctggtggaccagacgtcccgtttgtcctggcgcgtggcgggggat
ttcctgttgttgtcgagcgtctggatcggcgcttttgcactgatctggtcgggggcgcgg
ctgctgctgcgccatctgggccggcgccgctggctgcgcacccaccagcgcgtgcgcgac
ctgctcggttatctgctgccgtataccgctgcggcgttgatctgcctgccgctgaccctg
tacgtcagccacttcctgcaggtctcggtcggtcgcgccctggcgctgtgcttcgcctat
gccaccagcagcggcattttctccacctcggtgttgctgtgcgtgatcgtgatgttcaac
gccggccacaaacgccgggcggtggcgatgatccggcgcttcagcccccggccattgttc
atgatcggttttctcgccgccctcagcgatgccctgaccagcccgcagatcgcccgacaa
ctgggtggcaacatcaccagcagcatcgcggtgttcaccggcctgtttgcgtcggtaatc
tttggctggctggtgattcgcatgcgccggcccgtggcgcacctgatccgcaaccgcccg
ctggcccagcgcttgaagcaaccggccttgcaggagtcgctgcggattttctccgggctc
tggtattggccgatcctgttgatggtgctggtgtcggcggtgagcctgatcggtgtcggc
gaggacaaccagaaagccctgcgctgtgcgttgttcaccaccatcctgctgatcgccacg
gtgttcctcagcaccgtgttccagcatgtcttcaagtcgcccaaggccgaggccatccag
cgcgacagcgcctacaagggccgcctgttgagcctgctgcacgcgttgctgcgcatcgtc
atggcggtggtattcattgaggtcctcggacggatctgggggatttccctgttcgagttc
gcctcgcgcaatgccataggccgggcgatcagtgattccttgagccgcatcggcctgatc
ttcctgatgacctggctcacgtgggtggtgctcgacacggcgatccaggaagccctgaaa
ccgccgctgaacaagcgcggggcccgtcagcccagcacccgggtcaaaaccatcctgccg
ctgttgcgcaacgccgcgaaaatcatcctggtggtgatttgcgcaatcaccaccatggcc
aacctgggcatcaacgtcgcaccgttgctggccggtgccggggtggtggggctggcgatc
ggtttcggttcccagcaactggtgcaggatgtgatcaccgggctgttcatcatcattgaa
gacacgctgtccatcggcgactgggtggtgctcagttccggccacgccggcaccgtcgaa
ggcctgaccatccgcaccctgcgcctgcgtgacggcaagggcttcgtgcattcggtgccg
ttcggccagatcaaggccgtgaccaaccagtcccggcaattcgcctttgcgttcttctcc
gtgcagttcacttacgacaccgatgtcgaccaggccatcgagctgattcgcgaggccgga
cgttcgatcgccgaagacccgttcctgaaattcaacctgcaagggccgctggatgtgttt
ggcgtggacaagatggatctcaacggcgtggtgctcacggcgcagttccgcaccgtatcc
ggcgggcagtatgcggtgagccgggcgttcaaccagcagttgaagaagcttgtggataac
catccggcggtgcacttcgcgcagacttatccacagcaggtggtgttgcccaagcggttg
gtcgaggagcaaaaagcgggggatgaactgcccgatcaagctcaatga
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