KEGG   Pseudomonas brassicacearum DF41: CD58_05655
Entry
CD58_05655        CDS       T03174                                 
Name
(GenBank) RNA-binding protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pbc  Pseudomonas brassicacearum DF41
Pathway
pbc02024  Quorum sensing
pbc03060  Protein export
pbc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pbc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CD58_05655
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CD58_05655
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CD58_05655
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbc02044]
    CD58_05655
Enzymes [BR:pbc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CD58_05655
Secretion system [BR:pbc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CD58_05655
  Eukaryotic Sec-SRP protein
   CD58_05655
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 YqeC cobW APS_kinase AAA_33 ABC_tran AAA_31 AAA_19 AAA_30 AAA_16 AAA_24 ATP_bind_1 Helicase_RecD Thymidylate_kin KTI12 AAA_5 AAA_14 nSTAND3 Gag_FV_central 6PF2K TsaE NACHT AAA_17
Other DBs
NCBI-ProteinID: AHL32403
UniProt: W8PF81
LinkDB
Position
1274809..1276185
AA seq 458 aa
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLNLSAVPPAVVLMAGLQGAGKTTTVGKL
ARFLKERKKKSVMVVSADIYRPAAIKQLETLANDIGVTFFPSDLSQKPVDIAQAAIKEAK
LKFIDVVIVDTAGRLHIDEEMMGEIKALHAAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPERIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMLPGGGMPKM
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgaaaacctaaccgaccgtctctcgcagacgctgcgccatgtcaccggcaaggcg
aaactgaccgaggacaacatcaaagacaccctgcgcgaagtgcgcatggcgttgctcgaa
gccgacgtcgccctgccggtggtcaaggacttcgtcaattcggtcaaggaacgcgccgtc
ggtaccgaggtgtcgcgcagcctgacgccgggccaggcgttcgtgaagatcgtccaggcc
gagctcgaaagcctgatgggcgccgccaacgaagacctgaacctgagcgccgtgccaccc
gccgtagtgttgatggccggtctgcagggcgcgggcaagaccacgacggtcggcaagctg
gcgcgcttccttaaagagcgcaagaaaaagtcggtgatggtggtctccgcggacatctat
cgcccggcggcgatcaagcaactggaaaccctggctaacgacatcggcgtgacattcttc
ccgtccgacctgagccagaagccggtggacatcgcccaggcggccattaaggaagcaaag
ctcaagttcatcgatgtggtcatcgtcgataccgccggtcgcctgcacatcgatgaagag
atgatgggcgagatcaaggcgctgcatgccgcgatcaacccggtggaaaccctgttcgtg
gtcgatgcgatgaccggccaggacgcggccaacaccgccaaggcgttcggtgatgcgctg
ccgttgaccggcgtgatcctgaccaaggtcgatggcgacgcccgtggcggtgccgcactg
tcggtacgcgccatcactggcaaaccaatcaagttcatcggtatgggcgagaagagcgaa
gcgctcgaaccgttccaccccgagcgtattgcttcgcgtatcctgggcatgggcgacgtg
ctcagcctgatcgagcaggccgaacagaccctcgacaaggacaaggccgacaaactggcc
aagaagctgaagaagggcaagggcttcgatctcgaagacttccgcgaccagctgcaacaa
atgaagaacatgggcggccttggcgggctcatggacaaactgccgaacatcggtggcgtg
aacctggcgcagatgggcaatgcccagggcgcggctgagaagcagttcaagcagatggaa
gccatcatcaactccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaagcgtcgtatcgccatgggctccggtacccaggtgcaggacatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaaattctccgcaaaaggcggaatggcc
aagatgatgcgcggcatgggcggtatgttgcccggcggtggcatgccgaaaatgtaa

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